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SCNpilot_expt_300_bf_scaffold_7562_2

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(2659..3012)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: low-density lipoprotein receptor-related protein 2 isoform X5 n=1 Tax=Gallus gallus RepID=UPI000240D077 similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 107.0
  • Bit_score: 83
  • Evalue 1.80e-13
Low-density lipoprotein receptor-related protein 2 {ECO:0000313|EMBL:KGL73134.1}; Flags: Fragment;; TaxID=94827 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 107.0
  • Bit_score: 85
  • Evalue 4.90e-14
LRP2; low density lipoprotein receptor-related protein 2; K06233 low density lipoprotein-related protein 2 similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 107.0
  • Bit_score: 83
  • Evalue 5.50e-14

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Taxonomy

Tinamus guttatus → Tinamus → Tinamiformes → Aves → Chordata → Metazoa

Sequences

DNA sequence
Length: 354
TTGATTTTAGTTACACAACCATGTCGAACTGATAATGGTGAATGCTCAGATTTTTGTTTTGCTAAACGTGAACAAGGCGTTCTAACACGAGTATGCGGTTGTCGATATGGTCGAAAGATCAATACGAATAATAATCATGAATGTATTGATAATTCACAAGCTGAACCTGATTTAACATCATGTAATGGACGTTTTCAATGTCGAAATGGACGATGTATACCAATGAATTACAAATGTGATGGAGGTTTGTCATTAAACATAGATTTCTTTCAAAGAACAAAACTCTTTTGCTTATTAACAGATAATGATTGTTTCGACAATAGTGATGAACAGAATTGTCCACGTAAGAACTAG
PROTEIN sequence
Length: 118
LILVTQPCRTDNGECSDFCFAKREQGVLTRVCGCRYGRKINTNNNHECIDNSQAEPDLTSCNGRFQCRNGRCIPMNYKCDGGLSLNIDFFQRTKLFCLLTDNDCFDNSDEQNCPRKN*