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SCNpilot_expt_300_bf_scaffold_7562_5

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(4078..4896)

Top 3 Functional Annotations

Value Algorithm Source
Low-density lipoprotein receptor-related protein 2 n=1 Tax=Cricetulus griseus RepID=G3GU85_CRIGR similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 253.0
  • Bit_score: 199
  • Evalue 3.90e-48
low-density lipoprotein receptor-related protein 2-like similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 253.0
  • Bit_score: 199
  • Evalue 1.20e-48
Low-density lipoprotein receptor-related protein 2 {ECO:0000313|EMBL:EGV95643.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontog similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 253.0
  • Bit_score: 199
  • Evalue 5.50e-48

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Taxonomy

Cricetulus griseus → Cricetulus → Rodentia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 819
ATGCCTCAAGCTAATCTCATTCTTGAAAAGAACATTCGTCAGCCAAGATCGATTGCTGTCGAATGGATAACAAATAAATTATATATTCTTGAAAGTGATCTTGCTCGTATCGATATGTTTTCGTTAGATGGCAAACAATTGAAAACGAATATCGTTACGAATAACCTTCATCAACCGAGTTCAATTGCTATTGATCCCATCGCTGAATATTTATTTATCAGTGATGAAGGTGATCGTGATACAATAACTGCAAAAATCTTTCGTTGTCTTCTCGATGGAAGTCAATGTAAATCATTGATCGATCAAAAATTAGAACAACCTAGTGATTTAACTGTTGATCATATTAAACAACGGCTCTATTGGGTCGATCGAGCTCATGATTGTTTGTTCTGCATCGAATATTTTTCTAGAATAACAATTGCATCTGGCAGTCAGAATATTCCGTTTTCAGTTGGCATCGATCTATTTGAAAATCATATTTATTTAACCGACGATGTCAAAGGTGCTGTTCTTCAACTTCGACGTCATTTCGATTCGAATACAACGATATTCTATCGGCCACAAACGTTCATTCGTCCACGAGGTATTGCCGTTTATCATGAAACACGTCAACCCAATCGAACAAATCCATGTAATGGAACACAGAATGGCGGTTGTCAACATTTGTGTTTACTTGGACGACCTTCATTTCTATCGAATAGTTATCAATGTCGATGTCAATCAGGATTTCGATTAAAATCAGATTTGAAAACTTGTGAACGTAAGAGAATAATTTCTCATTCGAAAATGATGAATATTTATTTTCTTAGCAATCAATGA
PROTEIN sequence
Length: 273
MPQANLILEKNIRQPRSIAVEWITNKLYILESDLARIDMFSLDGKQLKTNIVTNNLHQPSSIAIDPIAEYLFISDEGDRDTITAKIFRCLLDGSQCKSLIDQKLEQPSDLTVDHIKQRLYWVDRAHDCLFCIEYFSRITIASGSQNIPFSVGIDLFENHIYLTDDVKGAVLQLRRHFDSNTTIFYRPQTFIRPRGIAVYHETRQPNRTNPCNGTQNGGCQHLCLLGRPSFLSNSYQCRCQSGFRLKSDLKTCERKRIISHSKMMNIYFLSNQ*