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SCNpilot_expt_300_bf_scaffold_4984_6

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 3416..3679

Top 3 Functional Annotations

Value Algorithm Source
platelet-activating factor acetylhydrolase IB alpha subunit; K01062 1-alkyl-2-acetylglycerophosphocholine esterase [EC:3.1.1.47] similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 109
  • Evalue 5.40e-22
Platelet-activating factor acetylhydrolase IB subunit alpha n=1 Tax=Wuchereria bancrofti RepID=J9BL09_WUCBA similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 109
  • Evalue 1.70e-21
Lissencephaly-1 homolog {ECO:0000256|HAMAP-Rule:MF_03141}; TaxID=6282 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Onchocerca.;" source="Onchoc similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 110
  • Evalue 1.10e-21

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Taxonomy

Onchocerca volvulus → Onchocerca → Spirurida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 264
ATGGACCTTGAATTTAAATTAGATGAAGCTTTACGAGAAGTTCAAACTGGCGGACCGACACGAGAAAAACGACAGCCTGGCGAATGGGTGCCCCGACCTCCTGAAAAATTTGAATTGAAAGGTCATCGAGATACGGTGACGCGTGTTGTCTTTCATCCAACTTACGATATCATCGCATCTGCAAGTGAAGACGCGACTATTAAAGTAAATGTTTTTGTTTTATTTAGAGAAAAAAATAAAAATATTCTTTTTTCTATTCATTAA
PROTEIN sequence
Length: 88
MDLEFKLDEALREVQTGGPTREKRQPGEWVPRPPEKFELKGHRDTVTRVVFHPTYDIIASASEDATIKVNVFVLFREKNKNILFSIH*