ggKbase home page

SCNpilot_expt_300_bf_scaffold_764_13

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(15094..15711)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD085A similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 204.0
  • Bit_score: 336
  • Evalue 2.60e-89
mRNA 3-end processing factor {ECO:0000313|EMBL:GAO54292.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 205.0
  • Bit_score: 338
  • Evalue 7.40e-90
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 205.0
  • Bit_score: 327
  • Evalue 2.00e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGCCGTGCGATGTGCTCGTCACCGAGGCGACCTTCGGACTGCCGGTGTTCGTCCACCCGCCGATCGAGGAGGAGATCGCGCGGCTGCTCCACGCGCGGGCGCTGCACCCGGATCGCTGCATCCTCGTCGGCGCCTATGCGCTCGGCAAGGCGCAGCGCGTCATCGCGGAGCTGCGGCGCGCGGGCCATGACGAGACGATCTGGCTCCACGGCGCATTGGCGCAGATGTGCCGCCTCTACGAGGAGCACGGCGTGCCGCTCGGCTCGCTGGGCCTGGTGATGGAGACGACGAAGGAGGCGCTCAGGGGGAGTATCGTGCTGTGCCCGCCGGGCGCGCTCAACGATCGCTGGGCGCGGCGGCTGCCCGATCCGGTGACGGCGATGGCGTCGGGGTGGATGCGCGTGCGGCAGCGCGCGCGCCAGCGCAACGTCGAGCTGCCGCTGGTGATTTCCGACCACGCCGACTGGAACGAGCTGACGCGGACGATCGCCGAGGTGGACCCGGCGGAGACATGGATCACCCACGGCCGCGAGGACGGGCTGCTGCGCTGGTGCGAGCTTCACCAGCGCCCGGCGCGCGCGCTTTCGGTGGTCGGCCTCTACGACGAGGACGATTGA
PROTEIN sequence
Length: 206
VPCDVLVTEATFGLPVFVHPPIEEEIARLLHARALHPDRCILVGAYALGKAQRVIAELRRAGHDETIWLHGALAQMCRLYEEHGVPLGSLGLVMETTKEALRGSIVLCPPGALNDRWARRLPDPVTAMASGWMRVRQRARQRNVELPLVISDHADWNELTRTIAEVDPAETWITHGREDGLLRWCELHQRPARALSVVGLYDEDD*