ggKbase home page

SCNpilot_expt_300_bf_scaffold_535_3

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2504..3943)

Top 3 Functional Annotations

Value Algorithm Source
carotenoid oxygenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002892747 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 466.0
  • Bit_score: 691
  • Evalue 4.40e-196
  • rbh
Dioxygenase {ECO:0000313|EMBL:GAO56178.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD- similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 449.0
  • Bit_score: 653
  • Evalue 1.90e-184
carotenoid oxygenase similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 464.0
  • Bit_score: 637
  • Evalue 2.80e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGGCCGGAACCGTCGAAACCGCGATCCGCTCGGTCGTCGCCAAGGGCATCGAGGTCGTCGCGGACTTCAACCGCAAGCATCTGCCGAAGACCGATCATCCCTTCCTTACCGGCATCCACCAGCCGCTCGGCGGCGAGATGACGTTGGTCGACCTGCCCGTCACCGGCACGATCCCGGCGGCGCTGGACGGGCGCTACCTGCGGATCGGCCCGAACCCGGTTGCGCCCGATCCGGCCGGCTATCACTGGTTCGTCGGCGACGGCATGGTCCACGGCATCGCGCTGAAGGACGGGAAGGCGCTGTGGTATCGCAACCGCTGGATCCGCTCGCGCGCGGTGGGCGCGGCGCTGGGCGTGCCGCCCGCTCCCGGACCGCGCCACGGCGATTTCGACACGGTGAACACCAACGTCCTCGACATCGCCGGTCGTACCTGGGCGCTGGTCGAAGCGGGCAGCTATCCGGTCGAACTGGACGAGACGCTGGAACAGCAGACCTACAATCCCTTCGACGGCACGCTGGAAGGATCGTTCACCGCGCATCCGCATCTCGATCCGCTGACCGGCGAGCACCACGCCATCGCCTATGAGGCGACCGATCCGGGCACGATCCGCCATGTCGTCGTCTCGGCGGAGGGCAAGGTGGTGCGCGAATTGCCGATCGCGGTGAAGAACGGACCGTCGATCCACGATTGCGCGATCACCGCGCGCTATGCGGTGATCCTCGACCTGCCCGTCACCTTCTCGATGAAGGCGCTGATCGGCGGGCACCGCTTCCCCTATCGCTGGAACCCCGATCATCGCGCCCGCGTCGGCCTGCTGCCGCGCCACGGCACGGCGGAGGACGTGATCTGGTGCGATGTCGATCCCGCCTATGTCTTCCACGTCGCCAACGCCTATGACGATGCCGACGGACGCGTGGTGATGGACGTGTGCGCCTATGAGACGATGTTCGCCGGCGGCCCGGAGGGGCCGAACGGCCGCAACCTCGGCCTCGAACGCTGGACGATCGACCCCGCCACGCGCATCGTCGCCCGCCGCACGATCGACGCCAGCCCGCAGGAATTCCCCCGCCCCGACGAGCGGCGCTTCGGCCAGCCCTATCGCTACACCTATGCGATGGCGCTGCCCGAGAGCGAGGAGGACCGGTTCGTCGGCGCGACGCGGCTCTACAAGCACGATCTGGAGACGGGCACGCGCGAGACGCACGACTTCGGCACCGGCCGTTATCCCGGCGAGTTCGTCTTCGTCCCCGCCGGGCCGGATGCGGCGGAGGACGAGGGCTGGCTGATCGGCCTCGTCATCGACCTGCCGCAAGAGACGACCGACCTTGCGATTATCGACGCGCGGGACTTCGCCGGGCCGCCGGTCGCCAGCGTCCGCGTGCCGCATCGCATCCCGCCGGGCTTTCACGGCAACTGGCTGGCTTCACAAGGCGGCTGA
PROTEIN sequence
Length: 480
MAGTVETAIRSVVAKGIEVVADFNRKHLPKTDHPFLTGIHQPLGGEMTLVDLPVTGTIPAALDGRYLRIGPNPVAPDPAGYHWFVGDGMVHGIALKDGKALWYRNRWIRSRAVGAALGVPPAPGPRHGDFDTVNTNVLDIAGRTWALVEAGSYPVELDETLEQQTYNPFDGTLEGSFTAHPHLDPLTGEHHAIAYEATDPGTIRHVVVSAEGKVVRELPIAVKNGPSIHDCAITARYAVILDLPVTFSMKALIGGHRFPYRWNPDHRARVGLLPRHGTAEDVIWCDVDPAYVFHVANAYDDADGRVVMDVCAYETMFAGGPEGPNGRNLGLERWTIDPATRIVARRTIDASPQEFPRPDERRFGQPYRYTYAMALPESEEDRFVGATRLYKHDLETGTRETHDFGTGRYPGEFVFVPAGPDAAEDEGWLIGLVIDLPQETTDLAIIDARDFAGPPVASVRVPHRIPPGFHGNWLASQGG*