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SCNpilot_expt_300_bf_scaffold_535_8

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(7364..7930)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B306F7 similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 183.0
  • Bit_score: 282
  • Evalue 3.20e-73
dTDP-L-rhamnose biosynthesis protein {ECO:0000313|EMBL:EZP55133.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 184.0
  • Bit_score: 313
  • Evalue 1.80e-82
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 190.0
  • Bit_score: 295
  • Evalue 1.30e-77

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGCGACAGTCCAGTGCAGTTGATCGAGCCGGTGCGTCATGGCGACGCGCGTGGGTGGTTCACGGAATATTACACCGAGCGGCGTTTCGCCGAGCGGGGCATCGCCTGCCGTTTCGTGCAGGACAATCATTCGCTGTCGGCGCCGGCCTTCACCCTGCGCGGGCTGCATTTCCAGACCCCGCCGCACGGGCAGGACAAGCTGGTGCGCTGCATCCGCGGGCGTATCCTCGACGTGGCGGTGGACGTGCGGCGCGGCTCGCCGACCTATGGCCGGCATGTCGCGGCGGAGCTGTCGGCGGCGAACGGGCGGCAGTTGTTCGTGCCGATCGGCTTCGCGCACGGCTTCCTGACGCTGGAGGACGATTGCGAGGTGACCTACAAGGTCTCCGATTATTACGCGCCGGAATGCGACGGCGGCATCCGCTGGGACAGCGCGGGGATCGACTGGCCGCTTCCGCCGGACATCGCGCCCGAGCTGTCGGCCAAGGACGCGAAGCTCCCGGCGCTGGCCGATTTCGACAGCCCCTTCCCCTATGACGGCCGCCCGTTGGCGCCGCTTGCCTGA
PROTEIN sequence
Length: 189
MSDSPVQLIEPVRHGDARGWFTEYYTERRFAERGIACRFVQDNHSLSAPAFTLRGLHFQTPPHGQDKLVRCIRGRILDVAVDVRRGSPTYGRHVAAELSAANGRQLFVPIGFAHGFLTLEDDCEVTYKVSDYYAPECDGGIRWDSAGIDWPLPPDIAPELSAKDAKLPALADFDSPFPYDGRPLAPLA*