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SCNpilot_expt_300_bf_scaffold_535_39

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 36014..37708

Top 3 Functional Annotations

Value Algorithm Source
response regulator PleD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF62 similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 537.0
  • Bit_score: 659
  • Evalue 2.80e-186
response regulator PleD similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 540.0
  • Bit_score: 631
  • Evalue 3.10e-178
Response regulator PleD {ECO:0000313|EMBL:AJP74510.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 540.0
  • Bit_score: 631
  • Evalue 1.50e-177

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGTTCGCGCTGTGCGCGGGCGGCGTCGCTTTTTTCCTAGCGTTGCTCGTCACTTCGCGCGACAATTTCGGGGCCGGCGCCTATGCCAGCGCGCTCATTCCGGCGATCGTCTGCGCGACGATGTGCTGGGCCGCGACTCAGCGCGCCGTCGCCACCACGGCGGAGGCGATCGACCGCGCGGTGGACCGGCTGGCGGAGGCCGCCGACGGCGAGATCGATCGGCGGGTGCCTGATGAGATACGGGCCGCCGTTCCGCAACTGGCGACCGCGATGGACCGGCTGTTCGCGCAGCTTGCCGACAATCTCGACAGCATCCAGCGGCTTGCGTTGTTCGATCCGGTGACCGGCCTCGCCAACCGCACCAATTTCCGCACCGGGGCGGAGCGGCTGCTGGCCGAGACGCCGCGCGAGACGGGTGCGCTGTTCTTCATCGATCTCGATCGCTTCAAGGCGGTCAACGACACGCACGGCCATGCCTGCGGCGACATGCTACTGGCGATGGTCGCCGATCGCCTGCGCGGCGTATCGGATCGCGCGGTGGCGGAGGCGGACATCTATCCGCCGCTGATCGGGCGGCTGGCGGGCGACGAGTTCACCATGCTGTTCCCGCTGCTCGCCGATCCGCGCGACGCCGGCTGGATCGCCGCGCAGGTGCTCGACGCGCTTGCCGCGCCTTTTCCGCTGATGGGCGGGGAGGCGTCGATCGGCGCCTCGATCGGCATCGCGCTGCGCCCCGATCACGGCATCACGCTGCACGACCTGATGCGCTGCGCTGACGCCGCGATGTATTGCGCCAAGTCCGACGGGCGCGGGCGGTTCGAACTGTATAGCGACGAACTGGCGGAGCAGATGGCCAGCCGCGTGCGCCTCGACGCCGAATTGCGCGACGCGCTCGATCGCGACGAATTCACCCTGGTGTTCCAGCCCGAGGTCTCGCTGGCGGACGGCAATGTCGTCGCGGCGGAGGCGCTGCTGCGCTGGCGCCATCCGCGCGACGGGCTGCGCCTGCCCGGCACTTTCATCGGCCGCGCCGAGGAAAGCGGGCTGATGGTGGAGATCGGCGACTGGGTGCTGGCGTGCATCGCGCGCACGGTCGCGCATTGGGCCTCGCTCGGCTTCGCGGGGAGGCTGGCGATCAACGTCAGCGCGCGCCAGATCGATCGCGTCGATTTCTTCACCCGGCTGCGCGCCGCGATGCGCGAGGCGGGAGCGCCGGCGCGGTTGCTGGAGCTGGAGATCAACGAGACGATCGCCGCCCACGCGCGTGCCGACGCCATCGCGGCGCTGGCGCAATTGCGCGAGGAAGGCGCGACGATCGCGATCGACGGCTTCGGCACCGGGCTTTCCAGCGTCGCGCGGCTGCGGCAATTGCCGATCGACCGCATCAAGCTCGACCGCGGGCTGATCGGGGCGATCACGCAGGATCATGCGGCGCGGGTCATCACCGGCTCGCTCGTCGGGCTGATCCACGGCCTCGGCTGCGAGGCGGTGGCGGAGGGCGTGGAGACGCCCGATCAGGTCGAGCTGCTGCGCATTCTCGGCTGCGATGCGATCCAGGGCTATGGCGTCGCGCGGCCGATGGGGGAGGAGGATTTCCTCGCCTGGTCCGCCGCGCTCGCCGATCTGGAGCTGGAAATGGAGTCGGAGATCAGGCTGGAGATCAGGCCCGAGATCAGGAGCGTGTCGCTCGGGTGA
PROTEIN sequence
Length: 565
MFALCAGGVAFFLALLVTSRDNFGAGAYASALIPAIVCATMCWAATQRAVATTAEAIDRAVDRLAEAADGEIDRRVPDEIRAAVPQLATAMDRLFAQLADNLDSIQRLALFDPVTGLANRTNFRTGAERLLAETPRETGALFFIDLDRFKAVNDTHGHACGDMLLAMVADRLRGVSDRAVAEADIYPPLIGRLAGDEFTMLFPLLADPRDAGWIAAQVLDALAAPFPLMGGEASIGASIGIALRPDHGITLHDLMRCADAAMYCAKSDGRGRFELYSDELAEQMASRVRLDAELRDALDRDEFTLVFQPEVSLADGNVVAAEALLRWRHPRDGLRLPGTFIGRAEESGLMVEIGDWVLACIARTVAHWASLGFAGRLAINVSARQIDRVDFFTRLRAAMREAGAPARLLELEINETIAAHARADAIAALAQLREEGATIAIDGFGTGLSSVARLRQLPIDRIKLDRGLIGAITQDHAARVITGSLVGLIHGLGCEAVAEGVETPDQVELLRILGCDAIQGYGVARPMGEEDFLAWSAALADLELEMESEIRLEIRPEIRSVSLG*