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SCNpilot_expt_300_bf_scaffold_850_1

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(599..1549)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB8E similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 327.0
  • Bit_score: 290
  • Evalue 1.50e-75
VacJ-like lipoprotein {ECO:0000313|EMBL:EZP57397.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 304.0
  • Bit_score: 281
  • Evalue 1.30e-72
vacJ; surface lipoprotein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 305.0
  • Bit_score: 269
  • Evalue 1.30e-69

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
TTGTCGTTTCCGGTCATCTTGTTCGCAACCCTGCTTCCCTCGTCGATGCAACCGACGGCAGCCGCATTTCCCGAAGCAGAAACCCGCGATGCCATTTCGCGGACCATGACCCCTTCGCTTCCGGCGCCTTACATCCAGGCGAGCCCTGGCCCGCCCCCTGCCGAACCGCCCCCGGCGATCGAGGCACCCCCCGCGAGCCGCCGCGGGAGCGCGGACAATAAAGCGTCGGAGGACGGTACACAGGCGGCGCCAGAGGACATCATAGTGGAGGCTCACCGTCGAAACGATGCCGGTGATCCGTTGCACGCGCTCAATGAAAAATCGTTCGAGGCCACACAGGCCGTCGACAAGGCCGTCATCGCTCCCATGGCATTCGCCTACAAACGCCATGTGCCAAGGCCGGTTCGTGACGGCGTGCGAAATATTCTCAAGAACCTTCGCGAACCAATAGTGCTCGTAAACTTCCTTCTCCAGCTCAAGCCCGGAAAAGCGGCAGAGACAGCGGGCAGGTTCGCGCTCAACTCGACTGCGGGCATCGGAGGTCTCCTCGATATTGCGAAACGACGGCCCTTCAATCTGCCGCGGCGTCCTAATGGATTTGCCGACACTCTTGGCTTTTATGGCGTCAAGCCGGGGCCATTCTTCTTCCTACCGCTGATCGGACCGACGACGCTGCGCGACGCGATCGGGGGCGTCGCCGATCGTGCGCTGCTGCTCACGGCGATCGGCGCCCCTTTCAACCGACCCGCCTATTCCGTGCCAGCCACCGTCTTGGGTACGCTCGATCGGCGCATCGAATTCGACGAAGACCTCAGGCGGATTCGCGACGAGACCGAGAACCCCTACGTATCTCGCCGCACCTTTTATCTGCGCAAGCGGCAGGNNNNCGCAGAATCCCTCCGCCTCGTCCGAACAAACGTCGCTGTCATCACGACCGCCGCTGCGATGTGA
PROTEIN sequence
Length: 317
LSFPVILFATLLPSSMQPTAAAFPEAETRDAISRTMTPSLPAPYIQASPGPPPAEPPPAIEAPPASRRGSADNKASEDGTQAAPEDIIVEAHRRNDAGDPLHALNEKSFEATQAVDKAVIAPMAFAYKRHVPRPVRDGVRNILKNLREPIVLVNFLLQLKPGKAAETAGRFALNSTAGIGGLLDIAKRRPFNLPRRPNGFADTLGFYGVKPGPFFFLPLIGPTTLRDAIGGVADRALLLTAIGAPFNRPAYSVPATVLGTLDRRIEFDEDLRRIRDETENPYVSRRTFYLRKRQXXAESLRLVRTNVAVITTAAAM*