ggKbase home page

SCNpilot_expt_300_bf_scaffold_752_6

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4331..5077)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8U0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 250.0
  • Bit_score: 389
  • Evalue 2.40e-105
  • rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ENY79866.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 244.0
  • Bit_score: 389
  • Evalue 4.40e-105
nitrate ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 243.0
  • Bit_score: 270
  • Evalue 6.00e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGAGCCGGGCAAAGGATATCGGCGTCACGATCCTGTTCTTCGCCGCCTTGCTGCTGGCGTGGGAGTTGGGGGTGCGCTGGTCGGGCGCGAAATCCTATCTGCTCGCGCCGCCCAGCGCGATCGTCGGGGAATTGTGGCGATCGCGCGCGGCGCTGGCGGACGGCACGCTCAAGACGCTGACGGAGGTATTCTGGGGCTTCGTCATCGCGCTGGCGGTGGGGGTGCCGGTGTCGGCGTTCGTGTTCTTCTCGAACGGCGCGCGGCGGACGGTCTATCCGTTGCTCGTCGCATTGCAGAGCATCCCCAAGGTCGGGCTGGCGCCGATCCTCGTCGCGTGGCTCGGCTATGGCCTGTCCTCCAAGCTGACGATGGCCTTCCTTTTCGCCTTCTTCCCGATCGTCGTTGCCGGCATGGGCGGCCTCGCCAGCACGCCGGCGCATCTGGAGGAGCATTTCCGCGCGCTCAGGGCGACGCGCTGGCAGACCTTCTGGCGGCTGCGCCTGCCGTGCGCGCTGCCGGCGTTCCTCGACGGCTGCAAGGTGGCGATGCCGCTGGCGGTGATCGGGGCGATCGTGGGCGAGTTCGTCGGATCGAACGACGGCCTCGGCAACCTGATCCTCACCGCGTCGGGATCGGGCAACACCGCGCTCACCTTCGCCGCGTTGCTGACGGTGACGGTCCTGTCGCTGCTGCTGTTCTACGGCGTCGAATATTGGGAGAAGTTCGTGTGGTGGCGCGCGGCATGA
PROTEIN sequence
Length: 249
VSRAKDIGVTILFFAALLLAWELGVRWSGAKSYLLAPPSAIVGELWRSRAALADGTLKTLTEVFWGFVIALAVGVPVSAFVFFSNGARRTVYPLLVALQSIPKVGLAPILVAWLGYGLSSKLTMAFLFAFFPIVVAGMGGLASTPAHLEEHFRALRATRWQTFWRLRLPCALPAFLDGCKVAMPLAVIGAIVGEFVGSNDGLGNLILTASGSGNTALTFAALLTVTVLSLLLFYGVEYWEKFVWWRAA*