ggKbase home page

SCNpilot_expt_300_bf_scaffold_713_23

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 18559..19083

Top 3 Functional Annotations

Value Algorithm Source
pathogenesis-like protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B40952 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 170.0
  • Bit_score: 231
  • Evalue 7.70e-58
pathogenesis-like protein similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 172.0
  • Bit_score: 224
  • Evalue 2.70e-56
Pathogenesis-related protein {ECO:0000313|EMBL:BAK66195.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 172.0
  • Bit_score: 224
  • Evalue 1.30e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGTCGCATCAACGACTGACATCGCTGCTCGGGGCTTTCGCGTTGCTGTCGACCATCCCTTTGACGGTCGGCGCGACCGACCCCACGTCCAACTTCGCCGAGCGGCTGCTGGCGCGGCACAACCGCGAGCGCGTGGCGATGGGGATCGCGCCGTTGCGCTGGGACGAGCGGCTGGCCGGCGCGGCGCAAGGCTGGGCCGATCATCTCGCCGCGACCGGCCGTTTTGAACACGCCCCGGAAAGCGCCGACAATCCCGAGGGCGAGAATCTGTGGGCCGGCACGCGCGGCGCCTTCACGCTGGAGCGGATGGTCGACGCGTGGATTCGCGAGAAGCGCTATTTCACCCCCGGCCTGTTCCCGAACAACAGCGCGACCGGCAATGTCGACGACATCGGCCATTACACCCAGCTCATGTGGCGCGACACCGGCGAGGTCGGCTGCGCGCTGGCGCGCGGGAGCGCGGAGGACGTATTGGTCTGCCGCTACAGCGACGCGGGCAATTACATCGGCGAGCGGCCGTTCTGA
PROTEIN sequence
Length: 175
MSHQRLTSLLGAFALLSTIPLTVGATDPTSNFAERLLARHNRERVAMGIAPLRWDERLAGAAQGWADHLAATGRFEHAPESADNPEGENLWAGTRGAFTLERMVDAWIREKRYFTPGLFPNNSATGNVDDIGHYTQLMWRDTGEVGCALARGSAEDVLVCRYSDAGNYIGERPF*