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SCNpilot_expt_300_bf_scaffold_633_21

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 13734..14228

Top 3 Functional Annotations

Value Algorithm Source
ribosome maturation factor RimM n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FEB521 similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 153.0
  • Bit_score: 227
  • Evalue 1.10e-56
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 162.0
  • Bit_score: 231
  • Evalue 1.00e-57
ribosome maturation factor RimM similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 222
  • Evalue 1.20e-55

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAGCGACAAGGCCGCAACTATCGAACCCGAGGTCGTCCTCGCAGCCGTCATCGGCGCGCATGGCGTGACCGGCGAAGTGCGGCTCAAGGTGTTCGCCGATGATCTCGGCGCGCATCGTTCATTCAATCGCGGCACGCTCACCCTGAAGGCGCTGCGTGACGGCCCGAACGGTGCGATTGCGCGCTTCGCCGAAGTGGGGGACCGCAATCGCGCCGAGGCGCTGCGCGGGATGGAGCTTTCCGTGCCGCGATCGGCGCTGCCCCCGCTCGGCAAGGGTGAATATTATCATTGCGACCTGATCGGACTCGCGGCGGTTTCGAGCGAAGGTGAGGCATTGGGCCGCGTTGTGGCGGTCGAGAATTTCGGCGCGGGCGACGTGATCGAGATCAAGCGTGCCAACGGCAAGCGCTTCATGGTGCCGATGCGCGTCGACGCGGTGCCGGAATGGAACGGCGAACGGCTGGTCGTTGCCACGTCTTTCGTCGATAATTGA
PROTEIN sequence
Length: 165
MSDKAATIEPEVVLAAVIGAHGVTGEVRLKVFADDLGAHRSFNRGTLTLKALRDGPNGAIARFAEVGDRNRAEALRGMELSVPRSALPPLGKGEYYHCDLIGLAAVSSEGEALGRVVAVENFGAGDVIEIKRANGKRFMVPMRVDAVPEWNGERLVVATSFVDN*