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SCNpilot_expt_300_bf_scaffold_658_4

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2009..2530)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000360E447 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 159.0
  • Bit_score: 123
  • Evalue 2.90e-25
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 167.0
  • Bit_score: 118
  • Evalue 1.00e-23
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 173.0
  • Bit_score: 97
  • Evalue 3.70e-18

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Taxonomy

R_Sphingopyxis_65_20 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGAAGGGTCTGGGCATCGATGATCCAATCGTCATCAGCCATGACGCGAGCTTGGACGAGCAGTATCGCGAGCTCTCGCCGTGGTTGAGTAGAAGGCTGCGGCACCGGCTGGGAAACCAGTGCGATGTCGACGACCTCGTCCAAGAAAGCTTCATCCGCTTTGGCCGCTACGACCGCCAGAGCCGGAACAGGCATCCCCGTGCTTTGCTCATCAGGATCGCAGGGAACCTCGTCACGGACGAGCAGCGCCGGGCACGCGCCCGGGGCATCGATTGCCAAGTGTCGCTCGACGAGCAGGCACTCGGCCCAAGATTGCTCACGGCCGCCGATCAGGAGGCGACGCTTTCGCTGAAGCGCGCCATCCTGAACCTGCCGGCGGATATACGCGAGGTCTTCATTCTCGCGCGATTTTCGCCAATGACTCAGGTCGAGATTGGGCAAGCGCTTCGAATATCGGTTAAGACAGTGGAATGGCGACTCGCCAAGGCGGTCAGAATGTGTCTCGATGAACTGGGACGATGA
PROTEIN sequence
Length: 174
VKGLGIDDPIVISHDASLDEQYRELSPWLSRRLRHRLGNQCDVDDLVQESFIRFGRYDRQSRNRHPRALLIRIAGNLVTDEQRRARARGIDCQVSLDEQALGPRLLTAADQEATLSLKRAILNLPADIREVFILARFSPMTQVEIGQALRISVKTVEWRLAKAVRMCLDELGR*