ggKbase home page

SCNpilot_expt_300_bf_scaffold_1078_2

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1306..4311

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSH4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 992.0
  • Bit_score: 797
  • Evalue 1.50e-227
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:AJA11754.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 966.0
  • Bit_score: 813
  • Evalue 2.90e-232
tonB-dependent Receptor Plug domain protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 966.0
  • Bit_score: 811
  • Evalue 2.90e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3006
ATGACCTTAAAGGGCGTCCTTCTCGTGTCGGCCGTGACGGCGATCGTGCCGCTGCCCGCGTACGCGAAACCTCAAGCGCAGAAGGTGGCCGGTGACCCTCTTGTTCTGGCGAGCGCCAGCCAAGCGAGCGTGGTCGCTGGCGATCCCGGTCAGGACGAAGCCCCCATCGCGCCAACCGGCGCGGAGGCGCCCCAATCCTCCGATATTGTCGTAACTGGCTCCCGTATCAGCAGGCGCGACCTGGTTTCGGCGAGCCCTATCGCCACCGTCGCGCAGGAGGATTTGGCGCGGGCCGGCAAGGTCAGCCTGGAAGCCACCCTCAATCAGCTGCCGCAATTCACGCCGTCGCTTGGAGCGAATTCGAACTCATTCATCGGCAGCGGCGCGATCGGGATTGCAACGCTCAATCTGCGCGGCCTCGGCGCGAATCGCAATCTGGTGCTGCTCGACGGCCGCAGACTGCCGGCCGCCAATGCACAAGGCGTGGTCGACATCAACATCTTGCCGCGCTCCATCATAGGCGATGTCGAGGTCATCAGCGGCGGCGCATCGGCGGTATACGGTTCCGACGCTGTGTCGGGCGTCGTCAATTTCAAGCTGCGTCAGCCTTTCAACGGCATCGAGCTCGATGCGCAAGCGGGCGCCTCAACGCGCGGTGATGCCGCGGCGCAGGACGTGTCGCTCGTCGCCGGGTTCAACGCGCCCGGCAGCGGCAACGTTATGCTGGCGCTGAACTATACCGGCCGGGGGCTTGTCACGCAGAGCAGCCGCCCCTTCTACTATCAGCTCGCGCCGAGCACGATCATTCCGACGGGCGTTGCGCTGCCGAGCGGCACCAATCTGCCGAGCGCCGCCGTCGTGAACGCGGTGTTCGCGCGATACGGCGTAGCGCCCGGCCGAGCGACGCCGACCTCGTCCTTCGGCTTCAACGACGACGGTACGCTATTCAACACCGCGAACGGCGCGAACTTCGTCAATCCGCTCGCCGGCAGCGAGCGATTCGTCCAGAACGCGGACGGCGCGGTCGGATATCGCACCGGCCGCGCATATCTCGCGGTCCCGCTCGAGCGCTTCTCTGCGTTCGGAAAGGCGGAATACAGCCTGAGCGACGACATTCAGATTTTCGCGCAGGGCCTCTATTCGACGTCCAAGGTCCGCAGCAATTTCAACGTCAACTTGTCCGGCGCCCAATGGTCGCTGATCGTGCCGGCCACCAACCCCTTCATCCCGGCGGACCTCCGCACCATCCTCGCGTCCCGGCCCGTCGCCTCCGCGCCGTTCGTGGTCAATCGGGCGCTGGAGGAATTGGGTGACCGGATCACGACGGTGCGATCCGATACCTTTCAGTTCGTCGCCGGTCTGCGCGGCACGCTGGGCGGGGACTGGACGTGGAACATCTACGGTTCCTATGATCGCAGCACGATCGATGAAACGCTCGCCAATTCCGTGTCGATCCCCAAGCTGAACGAGTTGGTAGCGGCGCCCGACGGCGGTGCTTCGATCTGCGCGGGGGGATATAACCCGTTCGGCTACACCAATTCGCTGCGGCTTTCCGCGCAATGCCGGGCCTACGTCGAGGGGGACACATCCAACCGCACACGGACCGATCGGCGCGCGGTTGAGGCCTCGTTGCAAGGGTCGCTGATCGAGCTGCCCGCCGGCCCCGCCAAGGCAGCGGTCACGCTCGATTATCGCCGGGAGGGCTTTCGGTTCACACCCGACCCGCTGATCCGTCGCGGCGACATCAGCACGATCAGTCCCACCGAGCCGTCCGAGGGGTCGATTACGGTCAAGGAAATCTCGGCCGAAATCCTCGTGCCACTGCTTCGCGACATGACGCTCGCGAAGTCGCTCAACCTGACGCTCGGCTTGCGCTATTCCGATTACGACACCAGCGGCGGCATCACGACTTACAAGGCGGAAGGCGACTGGCGGCCGGTCGAGCCCGTGCTGATCCGTGGAGGGTACGAGCGCGCCGTGCGCGCACCCAACATCGCGGAGTTGTTCAGCACCTCGGTCGGCGGCGCGACCTTCTTGGGCGTTCCGCCGAATGCCGGCGATCCCTGCGATATCGCCTCCGCCGCGCGCAATGGACCTGCCGCCGCGCAAGTGCGCAGCCTGTGTATCGCCACGGGGGTCCCCGCCGGCATCATCGATGCCTACACGTTCCGTGTCAGCGGCCTGCCCGCTGTGGTTTCCGGCACGCGCAGTCTCACGCCGGAAAAGGCGGACACCTACACTGCCGGCGTCGTCATAACGCCGAAGTTCAATACACCCGCACTGCGCCGCGTGTCGCTCTCGGTCGATTATTACAACATTACGATCAAGGATGCGATTGGGCTGATCGACGGGCCGACCGTCGTCACCAAATGCTATAACCTCGATGGCTCCAACCCAGGCTACTCCGCCTCGAATTTCTTCTGCTCGCTGTTCGGCCGGGCGGCGAACGGATCGCCGGGCGTCCTGCGGCAGCCCTATCTGAACCTTGGCGGGTTCAAGACGGCGGGCATCGACGCTCAGCTCAACATCCTGTCCGACTTGGCGGACATGGGGCTCGGCGCGAATGCCGGCTCGCTCAACTTCACCACAACGATAAGTTACCTCGACAATTTCAAGATCCAGCAGCTTCCGGGAGCCGTGGTGCAGGATTTCGCCGGCACAATCGGCACCGGCAGTCAGCCTTATCCGCGTTGGAAAGCGGTGACCTCCCTGACCTATCAGTCCGATTCCTTCCTCGTCGGCGGGCGGTGGCGGTATACCGGCCGCTTCAAGGATGTGAGCACCGTCCTCTCGCCCAATTTTGTCGTTCCCGGCGTGGGTGCCTACAGCCTCTTCGACGTCTTCGTGGAGGTCGACGTCGCGAAGCGGTTCAAGCTTCGCGGCGGCATCAACAATGTCGGCGATCGGCTGGTGCCTATCATCGGCGGGACGACCCCGTCGGACGGCGGCGGTACGTTCGACGACGTCGGCCGGACATTTTTCGCGGGCGTGCAGGCGAAATTCTGA
PROTEIN sequence
Length: 1002
MTLKGVLLVSAVTAIVPLPAYAKPQAQKVAGDPLVLASASQASVVAGDPGQDEAPIAPTGAEAPQSSDIVVTGSRISRRDLVSASPIATVAQEDLARAGKVSLEATLNQLPQFTPSLGANSNSFIGSGAIGIATLNLRGLGANRNLVLLDGRRLPAANAQGVVDINILPRSIIGDVEVISGGASAVYGSDAVSGVVNFKLRQPFNGIELDAQAGASTRGDAAAQDVSLVAGFNAPGSGNVMLALNYTGRGLVTQSSRPFYYQLAPSTIIPTGVALPSGTNLPSAAVVNAVFARYGVAPGRATPTSSFGFNDDGTLFNTANGANFVNPLAGSERFVQNADGAVGYRTGRAYLAVPLERFSAFGKAEYSLSDDIQIFAQGLYSTSKVRSNFNVNLSGAQWSLIVPATNPFIPADLRTILASRPVASAPFVVNRALEELGDRITTVRSDTFQFVAGLRGTLGGDWTWNIYGSYDRSTIDETLANSVSIPKLNELVAAPDGGASICAGGYNPFGYTNSLRLSAQCRAYVEGDTSNRTRTDRRAVEASLQGSLIELPAGPAKAAVTLDYRREGFRFTPDPLIRRGDISTISPTEPSEGSITVKEISAEILVPLLRDMTLAKSLNLTLGLRYSDYDTSGGITTYKAEGDWRPVEPVLIRGGYERAVRAPNIAELFSTSVGGATFLGVPPNAGDPCDIASAARNGPAAAQVRSLCIATGVPAGIIDAYTFRVSGLPAVVSGTRSLTPEKADTYTAGVVITPKFNTPALRRVSLSVDYYNITIKDAIGLIDGPTVVTKCYNLDGSNPGYSASNFFCSLFGRAANGSPGVLRQPYLNLGGFKTAGIDAQLNILSDLADMGLGANAGSLNFTTTISYLDNFKIQQLPGAVVQDFAGTIGTGSQPYPRWKAVTSLTYQSDSFLVGGRWRYTGRFKDVSTVLSPNFVVPGVGAYSLFDVFVEVDVAKRFKLRGGINNVGDRLVPIIGGTTPSDGGGTFDDVGRTFFAGVQAKF*