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SCNpilot_expt_300_bf_scaffold_1081_5

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3327..4505)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1219050 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 392.0
  • Bit_score: 694
  • Evalue 1.00e-196
Ribonuclease D n=1 Tax=Sphingomonas sp. S17 RepID=F3WSX0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 392.0
  • Bit_score: 694
  • Evalue 7.20e-197
  • rbh
ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 391.0
  • Bit_score: 679
  • Evalue 5.20e-193

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCACGTTCACCCATTGATCACCGACAGCGCGACGCTCGCCAACCTCTGCGCCCGCCTCGCCGACGCCCCCTTCATCTGCGTCGATACCGAATTCATGCGCGAGAGCACCTATTGGCCGGAGCTGTGCCTGATCCAGATCGCCGATACCGAGGAAGCCGCCGCGATCGATCCCAAGGCGCCGGGGCTGGACATGACGCCCCTGCTCGACCTTCTGGTCGATAACGAGGAGGTGCTGAAGGTATTCCACGCCGGCGGGCAGGATATCGAGATCATCTACAACCTCACCGGCAAGACGCCGCATCCGCTGTTCGATACGCAGATTGCCGCGATGGCGCTGGGGCAAGGTGAGCAGATCGGCTATTCGAATCTGGTCGATAGCTGGCTCGGCATCCAGATCGACAAGGGCGCGCGCTTCACGGACTGGTCGCGGCGGCCGCTCGATCAGCGGCAGGTGGATTATGCCATCGGCGACGTCACGCATCTGTCGAAGATATTTCCCCGGATGCTCGAACGGCTGCGCAAGACCGGGCGGGGCGCGTGGCTCGATCAGGAGATGGAGCGGCTGGCCGATCCGGCCAACTACGCCAACGATCCCGATCTCGCATGGAAGCGCGTCCGCATCTCCGGCCGCAAGCCCGAGGTGCTCGGGCGGCTGAAGGCGATCGCGCGCTGGCGCGAGATGGAGGCGCGGAGCAAGGATCTGCCGCGCGGCCGCATCGTCAAGGACGAGACGCTGGCGGACCTCGCCGGCCACCCACCGAAGAAGCAGGTCGACCTGTCCAGGGTGCGCGGGCTTTCCGCGACATGGGCGTCGAACGACATCGGCAAGCGCCTGATGACCGCCATCGCCGAGGCGCAACCGCTCTCCGCCGCCGAGATGCCGCCCCGCGACGATCGCAAGCCGGGGCTGGGCAAGGAAGGCTCGCTGGTCGCGGACCTGCTCAAGCTGCTGCTCAAGATCCGCGCGCGCGATATCGACGTGGCGCCGCGCCTGCTGGCGCGCAGCGACGAGCTGGAGGCGCTGGCCGCCGGGCAGCGCGAAGGTCTCGCGATTCTCGACGGTTGGCGTTACGATCAGTTCGGGCATGACGCGCTCGATCTGGTCGAGGGCCGACTCGGCTTCGCGGTCCAGGGCGGCAGGCTCAAGATGACCCGAACGGAGGGGACTGCCGCATGA
PROTEIN sequence
Length: 393
MHVHPLITDSATLANLCARLADAPFICVDTEFMRESTYWPELCLIQIADTEEAAAIDPKAPGLDMTPLLDLLVDNEEVLKVFHAGGQDIEIIYNLTGKTPHPLFDTQIAAMALGQGEQIGYSNLVDSWLGIQIDKGARFTDWSRRPLDQRQVDYAIGDVTHLSKIFPRMLERLRKTGRGAWLDQEMERLADPANYANDPDLAWKRVRISGRKPEVLGRLKAIARWREMEARSKDLPRGRIVKDETLADLAGHPPKKQVDLSRVRGLSATWASNDIGKRLMTAIAEAQPLSAAEMPPRDDRKPGLGKEGSLVADLLKLLLKIRARDIDVAPRLLARSDELEALAAGQREGLAILDGWRYDQFGHDALDLVEGRLGFAVQGGRLKMTRTEGTAA*