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SCNpilot_expt_300_bf_scaffold_1129_4

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 2762..3277

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K150_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 163.0
  • Bit_score: 84
  • Evalue 1.50e-13
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 163.0
  • Bit_score: 84
  • Evalue 4.20e-14
Transcriptional regulator LysR family {ECO:0000313|EMBL:ACM38598.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 163.0
  • Bit_score: 84
  • Evalue 2.10e-13

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCTCCGGCTGGGTGAGATCGACGCGATCATCGCGCCGCTCGGCGTCGGGTCGATCCGCACCGAGGAGTTCGACGACGCCTTTCTGTTCGACGACGAGCTTGTGTTCATGGTCGATGCCGACCGCCCGGAATCCGATCTATCGGAGAAGGGGCTGCTCAGCTCGCGCTTCGCGGCGTTCTGCGCGGAACGGGGTGACCAGGCCTCGTCGTTCGAGGGAGTCGTCCTGAACCAGCTCGGCGCACGCCGCTTCGACGCGATCCAGGTCATGAACTTCGTGCTGCTGCCCTTTCTCGTGGAAGGAACGCCGAACGTGGCGCTCATCCAGCGCTCGCTGGCCGTGCGGCTTGCCGGTTCCGCGTCGGTGCGCCTCGTCTCTCCGACGCGGCCGCTTCCTCAAGTCCGCATCCACCTGTACTGGAACAAGGCCAGGACCCGGGACCCGGGACACCGCTGGTTCCGCGAACAGCTGGCTGAGACGGCCGAGGCGTTCATGGCAGGACGCTCCCCTTCTTGA
PROTEIN sequence
Length: 172
MLRLGEIDAIIAPLGVGSIRTEEFDDAFLFDDELVFMVDADRPESDLSEKGLLSSRFAAFCAERGDQASSFEGVVLNQLGARRFDAIQVMNFVLLPFLVEGTPNVALIQRSLAVRLAGSASVRLVSPTRPLPQVRIHLYWNKARTRDPGHRWFREQLAETAEAFMAGRSPS*