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SCNpilot_expt_300_bf_scaffold_1191_14

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(12276..13040)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C004 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 254.0
  • Bit_score: 435
  • Evalue 3.90e-119
  • rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KEZ18698.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 254.0
  • Bit_score: 432
  • Evalue 4.70e-118
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 246.0
  • Bit_score: 397
  • Evalue 2.60e-108

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGCCATATCGCAGCGCCGCCGAGCATGAGGACGTGCCGCGCCCGGTGGTCGGCATCGGCAACGATTATCCGCCCTCGTTCGAGCTGGCCGAGCATCGCCACCGGCGCGGGCAACTCCTCTATGCCGCGAACGGCGTGGTCGCGGTCAGCACGCCGCAGGGCGCGTGGGTCGCCCCGCCCGAGCGCGCGGTGTGGATACCCGGCGGCACGCCACATGCCGTGCGCATGGTCGGCGCGGTGCAGACGCGCAGCGTGCTGATCGAGCCGAGCGCCTGCCCGGCGCTGGGCGGCGCGTGCCGCGTCGTCGCGGTGTCGCCGCTGCTGCGCCAGCTCCTGCTGGCGGCGGCGGAGATCCCGGTGGAATATGACGAGGGCGGGCGCGACGGGCTGGTGATGCGGCTGCTGGTGGTGGAGATCGAGCGCGCGCCGGTGATCCCCATCGCGGTGCCCTTCCCGCGCCACGCCGCGCTCGCCGCGCGCTGCCACGCCTTCCTCGAACGGCCGCGCGCGACCGCGACGATCGACCAATGGGCCGATGCGCTGGCGATGAACCGCCGGCGCTTCACCCGCCTGTTCCGGCGCGAGACCGGGATGAGCTTCGCGGAGTGGCGGCAGCAGGCGTGCCTGTCGGTCGCGCTGCCCCGGCTCGCGGCGGGCGAGCCGATCACCACCATCGCGCTCAATCTCGGCTATGCCGGGCCGGCGAGCTTCTCCACCATGTTCAAGCGCGCCCTGGGTGTGCCGCCAAGCCGCTACCGGCCCTGA
PROTEIN sequence
Length: 255
MPYRSAAEHEDVPRPVVGIGNDYPPSFELAEHRHRRGQLLYAANGVVAVSTPQGAWVAPPERAVWIPGGTPHAVRMVGAVQTRSVLIEPSACPALGGACRVVAVSPLLRQLLLAAAEIPVEYDEGGRDGLVMRLLVVEIERAPVIPIAVPFPRHAALAARCHAFLERPRATATIDQWADALAMNRRRFTRLFRRETGMSFAEWRQQACLSVALPRLAAGEPITTIALNLGYAGPASFSTMFKRALGVPPSRYRP*