ggKbase home page

SCNpilot_expt_300_bf_scaffold_4948_10

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(10836..12272)

Top 3 Functional Annotations

Value Algorithm Source
Cation transporter n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IXA9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 463.0
  • Bit_score: 794
  • Evalue 6.30e-227
Cation transporter {ECO:0000313|EMBL:EQB16530.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosut similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 463.0
  • Bit_score: 794
  • Evalue 8.80e-227
CzcA family heavy metal efflux protein similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 476.0
  • Bit_score: 586
  • Evalue 9.60e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
CCGTCCGCTTCGATCGACCAGTCGACACGGATGCAGCTCCTGATCGAAGACGCACTGAAGACGTTGCCCGAGGTTGCCTTGGTCTTTTCCAAGAACGGCAACGCTGATCTCGGCACCGATCCGATGCCCCCGAATGCGTCAGACACTTATGTCATCCCCAAGCCCGAGAACGAGTGGCCGGCCGATGTCCGCAGCAAGGAGGATATCCTCCGTCGTATCGAGGCAAAAATGAAGGCCCTGATCGGCAATCGGACGGAGATCCAGCAGCCGATCCAGATGCGCTTCAACGAACTGATTGCCGGCGTCCGCGCCGATGTCGCGATCAAGCTCTATGGGGACGATCTGGAACAGATGAGCCAGCAGGCCCGCCGGATCGCCGCAGCCATGCGAACGATCCCCGGCGCGGGGGACGTCAGCGCAGAGCAGACCTCCGGCGCCCCAACCTTCGACGTCAAGATCGATCGTCAGGCGGTCGCCCGCTATGACCTCTCGGTCGATGAAGTCGCAAATACCGTGTCTGCAGCGCTGGGTGGTCGCGAAGCGGGGCTGTTGTTTGAGGGTGACCGACGCTTCGACGTGGTCGTTCGCCTGCCCGATGCCCAGCGCGACGATCTGGAGACGCTCGGCGCGATCCCGGTGATGCTGCCTGCCGCCGACGGGCAATCCGCCCGCTCGATCCCGCTAAGAGAGGTGGCGGGGTTCAGCTATACGCAGGGATTGAATCAGATCAGCCGGGAGAACGGCAAGCGCATGGTGATCGTTCAGATCAACGTCCGCGGCCGTGATCTGGGCGGGTTCGTCAAGGAGGCCCAGGCAAAGATGGCGGGGATGGACCTGCCGGCCGGCATGTACACGGGTTGGGGCGGCACCTTCGAAAGCCTCCAGTCGGCGCGCCTAAGATTACTGATCGTCGTGCCAATCTGCTTCCTCGCAATATTCGGGCTCCTGTACATGGCCTTGGGCGGCGTCGTACCGGCGCTGATTGTGTTCAGCGCGGTGCCGATGGCGCTCGCGGGCGGGGTCTTCGCGCTGCTGCTGCGCGGCATCCCGTTCTCGATCACGGCGGCGGTCGGCTTCATCGCCTTGTCGGGGGTGGCCGTGCTCAACGGGCTGGTGATGATGAGCGCGATTGGGAAGTACCGCGAAGACGGTGCGAAGGAGGATGACGCGATCATAGGGGGCGCGATGGAGCGCGTGCGGCCGGTGCTGATGACCGCGCTGGTGGCGTCGCTCGGCTTCGTACCGATGGCGCTTGCGACAGGCACGGGCGCGGAGGTGCAGCGGCCGCTCGCGACCGTTGTCATCGGTGGGCTCATCACCTCGACGGCGCTGACGCTGTTGGTGCTGCCGGCCATTACCGCCTGGGCGTCGCGGCTGATTGCGCGGCGCAACGGTTTGCATGCACCGATAGTATCTCAACAGGGATCGATTGCGTGA
PROTEIN sequence
Length: 479
PSASIDQSTRMQLLIEDALKTLPEVALVFSKNGNADLGTDPMPPNASDTYVIPKPENEWPADVRSKEDILRRIEAKMKALIGNRTEIQQPIQMRFNELIAGVRADVAIKLYGDDLEQMSQQARRIAAAMRTIPGAGDVSAEQTSGAPTFDVKIDRQAVARYDLSVDEVANTVSAALGGREAGLLFEGDRRFDVVVRLPDAQRDDLETLGAIPVMLPAADGQSARSIPLREVAGFSYTQGLNQISRENGKRMVIVQINVRGRDLGGFVKEAQAKMAGMDLPAGMYTGWGGTFESLQSARLRLLIVVPICFLAIFGLLYMALGGVVPALIVFSAVPMALAGGVFALLLRGIPFSITAAVGFIALSGVAVLNGLVMMSAIGKYREDGAKEDDAIIGGAMERVRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGLITSTALTLLVLPAITAWASRLIARRNGLHAPIVSQQGSIA*