ggKbase home page

SCNpilot_expt_300_bf_scaffold_2085_1

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(1..438)

Top 3 Functional Annotations

Value Algorithm Source
General L-amino acid transport system permease protein AapQ n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CD79_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 146.0
  • Bit_score: 165
  • Evalue 3.30e-38
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKB82763.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 137.0
  • Bit_score: 224
  • Evalue 8.50e-56
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 136.0
  • Bit_score: 164
  • Evalue 2.10e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGGCATCCATCGACACCGCGCAACCACCGCCGCGGAGTTTCTCGTTCAACGATCCCGTCGTACGGGGCGTCATCTACCAGATCGTCGTTGCGGTTCTGGTGGTGGCGTTCCTGGTCTGGATCGTCAACAACACGGCGATCAACCTCAAGGCGCAGAACAAGACCTCCGGCTTCGACTTCCTGTGGAAGACGGCCGGCTTCAACATCAGCTTCACGCTGTTTCCGTTCGATCGCACGTCGCTGTACTGGCAGGCCTTTCTCGTCGGCCTCACCAACACCATTCTCGTCGCGGTGATCGGCATCTTCTTTGCCACGATCCTCGGCTTCACCATCGGCATCGGACGGCTGAGTTCGAACTATCTGGTGTCGCGGCTCGCCACCATCTACGTCGAGACCATCCGCAACATCCCGCTGCTGCTGCAGTTGTTCTTCTGGTAC
PROTEIN sequence
Length: 146
MASIDTAQPPPRSFSFNDPVVRGVIYQIVVAVLVVAFLVWIVNNTAINLKAQNKTSGFDFLWKTAGFNISFTLFPFDRTSLYWQAFLVGLTNTILVAVIGIFFATILGFTIGIGRLSSNYLVSRLATIYVETIRNIPLLLQLFFWY