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SCNpilot_expt_300_bf_scaffold_3889_3

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 1781..2332

Top 3 Functional Annotations

Value Algorithm Source
DNA binding response regulator PrrA (RegA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 184.0
  • Bit_score: 292
  • Evalue 3.90e-76
Chemotaxis protein CheY {ECO:0000313|EMBL:KFL26651.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 183.0
  • Bit_score: 316
  • Evalue 2.10e-83
DNA binding response regulator PrrA (RegA) similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 184.0
  • Bit_score: 292
  • Evalue 1.10e-76

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGCACAGTCGATGAACTTCTTGCGGCCGACCGGACCCTGCTTCTGGTCGATGACGACAAGACCTTCCTGACCCGCCTCGAGCGGGCCATGCAGAAACGTGGCTTCGATGTCCGGATTGCCGACACCGTGGCCGGCGGCCTTGCTGCCGTCTCCGAAGCGCCCCCGGCCTATGCCGTGGTCGATCTCAGGCTCGAGGACGGCAACGGCCTCGACGTGGTCGCGGCGCTGCACCAGAAGCGCGAGGATGCCCGCGCCGTGGTGCTCACCGGCTATGGCAATATCGCGACCGCAGTGACGGCGGTGAAGCTCGGCGCGGTGGATTACCTGTCGAAGCCGGCCGACGCCGAAGACGTGATCAACGCGCTGCTCGCCACCGGCAACAAGCCCCCCGAGCCGCCGGAAAACCCGATGTCGGCCGACCGGGTGCGTTGGGAACACATCCAGCGGGTCTATGAGCTGTGCGACCGCAACGTCTCGGAGACGGCGCGGCGGCTCAACATGCACCGCCGCACCCTGCAGCGCATCCTCGCCAAACGCGCGCCGAAATAA
PROTEIN sequence
Length: 184
MSTVDELLAADRTLLLVDDDKTFLTRLERAMQKRGFDVRIADTVAGGLAAVSEAPPAYAVVDLRLEDGNGLDVVAALHQKREDARAVVLTGYGNIATAVTAVKLGAVDYLSKPADAEDVINALLATGNKPPEPPENPMSADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRILAKRAPK*