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SCNpilot_expt_300_bf_scaffold_7274_5

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 1427..2638

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor containing a TPR repeat domain n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LFD1_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 412.0
  • Bit_score: 383
  • Evalue 2.20e-103
Uncharacterized protein {ECO:0000313|EMBL:KKB08884.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 409.0
  • Bit_score: 680
  • Evalue 1.60e-192
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 408.0
  • Bit_score: 370
  • Evalue 7.00e-100

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
TTGGACGGCAACCTTCAAGAACGTGGGCGGCGGGCGGCGGAGAACGCTGCCCGAACGTCCTACGGGCGCCTCCTCGCGTATCTTGCGCGCCAATGGAGAGACGTAGCCGCAGCCGAAGACGCGCTGGCCGAGGCGTTTGCACGCGCGCTCGACAACTGGCCAACACAAGGCGTGCCGGCCAACCCCGATGCTTGGCTGATGGCAGCGGCGCGCAACCGGCTGCGAGATGGAGCGCGGGCGCGGAAAACACGTGAACAAACGACCAGCAGCCTCCTGGTGCTGGCGCCGACAGAAACCGAGGAAACCCCTGTGGTTGCCGACAAGCGGCTGGAGCTGATGTTTGTGTGCGGCCACCCGGCAATCGATGCTGCCGCGCGCACGCCGCTGATGCTGCAAACCGTGCTGGGGCTGACGGCCGAGCGCATCGCCTCTTCGTTCCTTGTTTCGCCCGACACGATGGGACGGCGGCTGAGCCGGGCCAAAGCGCGCATCAAGGACATAGGGATTGCCTTTGAAGTGCCAGGGGAAGACGAGCTGGGTGAGCGTATGGGCGATGTGCTCGAGGCGATCTACGCCGCTTATGGGCAGGGCTGGGACAGCACGGGTAGCGACGACCAAACGCGCAAGGGGTTGACCGAAGAAGCGATCTGGCTGGCGCGGGTACTGGTAGAGCTACGGCCAGAGGACGCCGAGGCACTGGGCCTTCTGGCGCTGATGCTGTTTTGCGAAAGCCGCAGCGCCGCGCGGCGGGTGGAGGGGCGCTTTGTGCCGCTTCGCGAGCAGGATACAGCGCTCTGGAACTTGCCGATGGCACGCGAGGCCGAGGAAAAACTGCGGACGGCCGGCGGGCTGAAGCAGCCGGGACGCTTCCAGCTGGAGGCGGCGATCCAGTCGGTGCTGGTGAAATCGCGCTTGACGGGCGCGGATATGCGCCTGCCGACGTGGACGCTGCACGGACTTTTGGCGCAGAACGCACCCACGGTCGGCAATCTAGTGGGGCTGGCGGCACCCACCGCCGAGGTGAATGGCCCAGAGGCGGGTCTTCATGAACTGGCTCAGCTGCCCGAAACAATGACACGCGATTACCAGCCGTTTTGGGTACTCAAGGCGCAATTGCTCCAGCAAGCCACTGCAACGGCCTTCTCGCGAGCCATCGGCCTGACGGAGGATGGGGCCGTTCGCGCTTATCTCATCGGAAAGTCGGCGCAATAG
PROTEIN sequence
Length: 404
LDGNLQERGRRAAENAARTSYGRLLAYLARQWRDVAAAEDALAEAFARALDNWPTQGVPANPDAWLMAAARNRLRDGARARKTREQTTSSLLVLAPTETEETPVVADKRLELMFVCGHPAIDAAARTPLMLQTVLGLTAERIASSFLVSPDTMGRRLSRAKARIKDIGIAFEVPGEDELGERMGDVLEAIYAAYGQGWDSTGSDDQTRKGLTEEAIWLARVLVELRPEDAEALGLLALMLFCESRSAARRVEGRFVPLREQDTALWNLPMAREAEEKLRTAGGLKQPGRFQLEAAIQSVLVKSRLTGADMRLPTWTLHGLLAQNAPTVGNLVGLAAPTAEVNGPEAGLHELAQLPETMTRDYQPFWVLKAQLLQQATATAFSRAIGLTEDGAVRAYLIGKSAQ*