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SCNpilot_expt_300_bf_scaffold_2816_2

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: 852..1469

Top 3 Functional Annotations

Value Algorithm Source
amino acid transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB93D similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 230
  • Evalue 1.20e-57
Scaffold2, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34029.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 209.0
  • Bit_score: 229
  • Evalue 4.80e-57
amino acid transporter similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 207.0
  • Bit_score: 224
  • Evalue 3.10e-56

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCGCTCGAGACCTGGTGGCTCTATCTCGGCGCCGTCGTGCTGATCGCCAGCACGCCGGGCCCCAACGTGCTCTACGTCACCACCCGGAGCATCCGCTTCGGGTTGGGACCGGCCTTTGTTGGCATGACGGGCTGCCTCGTGGCGCTCGTGCTGATGCTCACGGGGTCGGTCGCCGGCTTGAGTGCGCTCCTGCTGGCACTGCCGACCGCTTTCGATGTCCTGAAGATCGCGGGCGCCGCCTACCTGGTCTATCTCGGCATTCAGCTTTGGCGCGAGCCGGTCGAGCCCGATGCGGTGCCGTCGCCGACGGGCACATCGAAAGCGGCACTATTCCGCGACGGATTCCTGGTCGGCATCAGCAATCCCAAGCTGCTGATCTTCGCGGCGGCCTTCTTCCCGCAGTTCATCGACCCCACGAGCGCGTGGCTGCCGCAGTTCGCGCTGATGGTCGCGACCTTCATGGGCGTCGAGCTATTCTTCTACTCGATCTACGCGCTCTCCGGCCGCAAGCTGGCGGACCGGCTGATGCACGGGATCTGGCGGCGCCGATTGAACCGGGCCAGCGGCCTGGTCTTCATCGGCTTCGGCGCCGCCTTGCTGCGCTATAAGCCCTGA
PROTEIN sequence
Length: 206
MALETWWLYLGAVVLIASTPGPNVLYVTTRSIRFGLGPAFVGMTGCLVALVLMLTGSVAGLSALLLALPTAFDVLKIAGAAYLVYLGIQLWREPVEPDAVPSPTGTSKAALFRDGFLVGISNPKLLIFAAAFFPQFIDPTSAWLPQFALMVATFMGVELFFYSIYALSGRKLADRLMHGIWRRRLNRASGLVFIGFGAALLRYKP*