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SCNpilot_expt_300_bf_scaffold_5275_1

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: comp(2..1840)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter barrel domain protein 6 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPW6_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 647.0
  • Bit_score: 410
  • Evalue 2.50e-111
Polymorphic outer membrane protein B {ECO:0000313|EMBL:CCB89349.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 696.0
  • Bit_score: 451
  • Evalue 1.80e-123
pmpB-C; polymorphic outer membrane protein B similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 635.0
  • Bit_score: 419
  • Evalue 2.00e-114

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Taxonomy

Simkania negevensis → Simkania → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1839
TTGCAGCTTGGCAGCGGCGGCAGCCTGGCCTCGAGCGGCGCCGTGACGGTGACCGGCGGCACCTTCGATCTGAACGGCCAGGATCAGACCGTGAGCGCACTGTCGGGGACGGGCGGCGCGATGGCGCTGAACGGCGGCGCAGCGCTGACGGTGAACCAGAGCAGCGACACCAGCTATGCCGGCTCGCTCACCGGCACGGGCAGCCTGACCAAGTCGGGCAACGGCACGCTGGTGCTGAGCGGCAGCAACAGCTACGGCGGCGGCACGACGGTCTCGGACGGCACCTTGCAGGGCACGACGTCGAGCCTGCAGGGCAACATCACCAACAACGCCAGCGTCGTGTTCGATCAGGCCACAGTCGGCACCTATGCCGGCAGCATGACGGGCAGCGGCACCTTGACGGTCGGCGGCGGCGGCACGGTGGTGCTGACGGGCAGCAACAGCTTCACGGGCGGCACGACGATCACTGCCGGCAGCCTCCTGCAGATCGGCAACGGCGGCACGTCGGGCTCGCTGTCGGGCAACGTGCTGAACGACGGCACCCTGGCCTTCTTCCGCTCCGACACCATCACCTTCGCCGGCGATATCAGCGGTACGGGTGGGTTGCTGTTCATGGGCGGCACCACGGTGACCCTGACGGGCAACAACAGCTTCACCGGCGGCATCGCCCTGAGCGGCGGCACGATCGTGGTGCAGGCGACGGCAAGCTTCACCAGCAGCCACAACATCGTGCTGGCGACGGGCGGCGGCACCTTCGAGACGGGCGGCAACGTGCTGACCCTGGCCGGCACCATCTCCGGCGCCGGTGGCCTGACGGTAGGGGCGGGCAGCTCGCTGGTGCTGACCGGCACCAATACATACGCGGGCGGTACGACGATCGGGGCGGGCGGTCTGCTGACCTTGGGCGGCACGGGCTCGATCCAGGGCAACGTGGCCAACAGCGGCACCCTGCAGTTCGCGGGCACGGGCACCAACACGTTCGGCGGATCGATCTCGAGCACTGGTGCCGTGCAGCAGGTGAGCGGCACGACGGTGCTGACCGCAGCCAGCAGCTACACCGGCGGCACGACAATCAGCGGCGGCACCTTGCAACTCGGCAATGGCGGCAGCCTGGCCTCGAGCGGCGCAGTGACGGTGACCGGCGGCACCTTCGACCTCAATGGCCAGAACCAGACGGTGGGGTCGCTGTCGGGCAGCATCGGCGGCACGGTGGCGCTGAACGGCGGCGCGGCGCTGACGGTGAACCAGGCTGGCAACACCATCTACGCCGGTACGCTGGCCGGTACGGGCGGCCTGCTCAAGACGGGCAGCGGCACGCTGACCTTGACCGGTACCAACAACTACAGCGGCGGCACGACGATCAACGGCGGCACGTTGCAGTTGGGAGCCGGCGGCAGCGTGGCCTCGAGTGGCGCGGTGACGGTGACCGGCGGCACGTTCGACCTCAATGGCCAGAACCAGACGGTGGGGTCGCTGTCGGGCAGTGGCGGCACCGTGGCGCTCAATGGCAACGCGGCGCTGACGGTCGACCAGACCACGAGCACCAGCTACGCCGGTGCGATCACCGGCAGCGGCAGCCTGGTGAAGGACGGTAGCGGCACGCTGATCCTCACGGGGACGAACAGCTACACGGGCGGCACAACGGTGTCGGACGGCACCTTGCAGGGCACCACGTCGAGCCTGCAGGGCGATATCACCAACAACGCCGCGGTGGTGTTCGACCAGACGGGCAGCGGCACCTATGCCGGCAGCATGACGGGAACCGGTACGCTCACGGTGAGCGGCGGCGGCACGGTGGTGCTGACGGGCAGCAACAGCTTCACGGGAGGCACGACGATC
PROTEIN sequence
Length: 613
LQLGSGGSLASSGAVTVTGGTFDLNGQDQTVSALSGTGGAMALNGGAALTVNQSSDTSYAGSLTGTGSLTKSGNGTLVLSGSNSYGGGTTVSDGTLQGTTSSLQGNITNNASVVFDQATVGTYAGSMTGSGTLTVGGGGTVVLTGSNSFTGGTTITAGSLLQIGNGGTSGSLSGNVLNDGTLAFFRSDTITFAGDISGTGGLLFMGGTTVTLTGNNSFTGGIALSGGTIVVQATASFTSSHNIVLATGGGTFETGGNVLTLAGTISGAGGLTVGAGSSLVLTGTNTYAGGTTIGAGGLLTLGGTGSIQGNVANSGTLQFAGTGTNTFGGSISSTGAVQQVSGTTVLTAASSYTGGTTISGGTLQLGNGGSLASSGAVTVTGGTFDLNGQNQTVGSLSGSIGGTVALNGGAALTVNQAGNTIYAGTLAGTGGLLKTGSGTLTLTGTNNYSGGTTINGGTLQLGAGGSVASSGAVTVTGGTFDLNGQNQTVGSLSGSGGTVALNGNAALTVDQTTSTSYAGAITGSGSLVKDGSGTLILTGTNSYTGGTTVSDGTLQGTTSSLQGDITNNAAVVFDQTGSGTYAGSMTGTGTLTVSGGGTVVLTGSNSFTGGTTI