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SCNpilot_expt_300_bf_scaffold_8074_3

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: 1927..2373

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XGW1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 131.0
  • Bit_score: 114
  • Evalue 1.20e-22
LysR substrate binding domain protein {ECO:0000313|EMBL:EFF73915.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 131.0
  • Bit_score: 114
  • Evalue 1.60e-22
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 129.0
  • Bit_score: 113
  • Evalue 4.30e-23

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGGCCATCCCCCTCGATCTGCTCGAGACATTCGTTGCCGTCGCCCGGTCGGGCCGGATGCGCGACGCCGCCACTCACCTGTCGCTGACGCCGGGGGCGATCAGCCAGCGCGTGCGCGACCTCGAGGAGCTGGCGGGCCAGCGCCTGTTCACGCGCACCCAGACGGGCGTGACTCTGACCATCGCCGGCCGAGCGCTGTTCGACGCGCTGGACGAACCCTTCCACCGCATCGACGAGGCCCGCCGCGGGCTGGCGGCTCCCTCGTCGCGGCGCGTTCGCGTCAGCACCATGGGGTCCTTCGCCGCGAGCTGGCTGGTGCCGCGCCTCTCGCGCTTTGCCGAACGCCATCCCGAGATCGACGTCGAGCTGGAGACGACGAGCCGCTCCGTCACGGGCTGGGCGACTATCCGGGCCTGGTTTCGACCAAGCTCGTGGCGCCGGAACTGA
PROTEIN sequence
Length: 149
MAIPLDLLETFVAVARSGRMRDAATHLSLTPGAISQRVRDLEELAGQRLFTRTQTGVTLTIAGRALFDALDEPFHRIDEARRGLAAPSSRRVRVSTMGSFAASWLVPRLSRFAERHPEIDVELETTSRSVTGWATIRAWFRPSSWRRN*