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SCNpilot_expt_300_bf_scaffold_210_22

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(17520..18479)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheV n=1 Tax=Thiobacillus thioparus RepID=UPI0003606C1F similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 319.0
  • Bit_score: 615
  • Evalue 3.50e-173
  • rbh
CheW protein; K03415 two-component system, chemotaxis family, response regulator CheV Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 319.0
  • Bit_score: 614
  • Evalue 1.10e-172
chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 316.0
  • Bit_score: 540
  • Evalue 3.10e-151

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCAAACGATCCAGCAGGAAATTGACGAACGGACCAATCTGACCAGTTCCAACAAACTGGAACTGCTGTTGTTTCGTCTGGGCGATGACCCCGGTCTCGACCGCAACGAGCTGTTCGGCATCAACGTGTTCAAGATTCGCGAAATCATCCCCATGCCGACCATCACGGCCGTCGCCGGATCGCCGCCCCACATGATGGGCGTGGTCGATCTGCGCGGCCAGATCCTGCCGGTCATCGACCTGCCGGCCGTGGCGGGCTGCACCCCGAAAACGGGGCTGAACATCCTGCTGATCACCGAATACGCCCGTAGTACGCAAGCTTTTGCCGTCGAATCGGTCGAGGACATCGTGCGGCTCGACTGGCGCCAGGTGCTGTCTGCCGAAGGCAATGGCGCGAGCGGCATGGTCACCAGCATCGCCCGCCTGGACGGCGAGAACAGCGATCGGCTGGCCCAGGTGCTCGACGTGGAAACGATCCTGCGCCAGGTCATGCCGTCGACCGAACTGGAAATCGATCCCGAGAATATCGGCCCGCATGTCGATCTCAAACCTGGCACCGTCATCCTGGCGGCCGACGACTCACTGATCGCGCGCACCATGATCGAGCAGGGGCTCGAGGCCATGGGCCTACCCTACATCATGTGCAAGACCGGGAAGGAGGCCTGGGACCAGTTGCAGGCCTTCTCCGCCAAGGCGCAGGAAGAAGGCAAAACCGTCCACGACCGGGTCGCCCTGGTGCTGACCGATCTGGAGATGCCCGAGATGGATGGCTTCACGCTGACCCGCAACATCAAGCAGGACCCGCGATTCAGCGCCATTCCCGTGGTGATCCACTCCTCGCTGACCGGATCGACCAACGAGGCGCACGTCAGGAAGGTCGGCGCAGATGCCTATGTCGCGAAATTCGTCGCTGAGGACCTGGCAAATGCCTTACGCCAAGCACTGAGCACCGTGCACTGA
PROTEIN sequence
Length: 320
MQTIQQEIDERTNLTSSNKLELLLFRLGDDPGLDRNELFGINVFKIREIIPMPTITAVAGSPPHMMGVVDLRGQILPVIDLPAVAGCTPKTGLNILLITEYARSTQAFAVESVEDIVRLDWRQVLSAEGNGASGMVTSIARLDGENSDRLAQVLDVETILRQVMPSTELEIDPENIGPHVDLKPGTVILAADDSLIARTMIEQGLEAMGLPYIMCKTGKEAWDQLQAFSAKAQEEGKTVHDRVALVLTDLEMPEMDGFTLTRNIKQDPRFSAIPVVIHSSLTGSTNEAHVRKVGADAYVAKFVAEDLANALRQALSTVH*