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SCNpilot_expt_300_bf_scaffold_210_241

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(231979..232284)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S30P / sigma 54 modulation protein id=12493136 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 102.0
  • Bit_score: 180
  • Evalue 9.10e-43
30S ribosomal protein S30P / sigma 54 modulation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 101.0
  • Bit_score: 147
  • Evalue 9.10e-33
30S ribosomal protein S30 similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 101.0
  • Bit_score: 144
  • Evalue 2.00e-32

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAAACCCCGCTTCAAATCACCTTCCGCGACATGCCCCCCTCCGACGCACTCGAGACGCACATCCGCGAGAAGGCCCAGAAACTCGAACAGCTTTTCGCCGACATCGTCAGTTGCCGCGTCGTGGTCGAACAGCCTGCAAAACATCAGCAACAGAGCAAGCCGTTCAACATCCACATCGACCTGGGCGTGCCCGGGAAGGAAATCGTGGTGGACAGGCAGGAGAACGAGGATGCCTACATTGCCCTGCGCGACGCTTTCGACGCCGCCAAGCGGCAACTGGAAGACTACGCGCGGCAGTTGTGA
PROTEIN sequence
Length: 102
MKTPLQITFRDMPPSDALETHIREKAQKLEQLFADIVSCRVVVEQPAKHQQQSKPFNIHIDLGVPGKEIVVDRQENEDAYIALRDAFDAAKRQLEDYARQL*