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SCNpilot_expt_300_bf_scaffold_159_55

Organism: SCNPILOT_EXPT_300_BF_Xanthomonadales_68_36

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(61977..62879)

Top 3 Functional Annotations

Value Algorithm Source
Probable LysR-family transcriptional regulator n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W6D8_BORPA similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 299.0
  • Bit_score: 443
  • Evalue 2.20e-121
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 299.0
  • Bit_score: 443
  • Evalue 6.30e-122
Probable LysR-family transcriptional regulator {ECO:0000313|EMBL:CAE38268.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 299.0
  • Bit_score: 443
  • Evalue 3.10e-121

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Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAGATCACCTTCGACGAACTGCAGACCTTCATCGCCGTGGTCGACACCGGCGCGATCTCGCGTGCGGCCGAGCATCTGGGGCTGACCGTGTCGGCGACCAGCCGCAGCCTGGCGCGGCTGGAGGAGAAGCTGCAGACCACCTTGCTGCGGCGCACGACCCGGCGCCTGGAGCTGACCGAGGAGGGCGCCGAATTCCTGGAGCGGGCGCGGGCGCTCGTGATCGCGGCCGAAGAGGCCGAGGAGCAGATGATCGCGCGGCGCCAGGTGCCGGCCGGGCGCCTGCGCGTGGATGCGGCCACGCCGTTCATGCTGCACGTGATCGTTCCGCGCGTGGCCGGCTTCCGCGCGCGCTATCCGCAGGTCGAGCTGGAACTGGACAGCAACGAAGGCATCGTCGACCTGATCGAGAAGCGTACCGACGTGGCCCTGCGCATCGGCGCGCTGAAGGATTCGAGCCTGCATGCGCGGCCGCTCGGCGCGAGCCGCCTGCGCGTGCTGGCCAGCCCGGCCTATCTGCGCCGCCGCGGCACGCCGGCCGCCGTGGAGGAGCTCGCCGATCACGTGCTGCTCGGCTTCAACCGGCCCGAGACGTTGAACACCTGGCCGCTGCGCGACGCTTCCGGCGATTCGCTGCGCGTGCGGCCCGACCTCGCGTCATCCAACGGCGAGACCTTGCGCCAGCTCGCGCTGGCCGGTGAGGGTCTGGTCTGCCTGTCCGACTTCATGACCGGCGAGGACCGCCGCGAAGGCCGCCTCGTGCCGGTGCTTGCCGGTCAGACCCAGGACGTGCGCCAGCCGATCAACGCGGTCTACTACCGCAACACGGCGCTGGCTTCGCGCATCAACTGCTTCATCGACTACCTGATCGAGGCGCTGGGGCCGAATCGCTTCGACGAATGA
PROTEIN sequence
Length: 301
MKITFDELQTFIAVVDTGAISRAAEHLGLTVSATSRSLARLEEKLQTTLLRRTTRRLELTEEGAEFLERARALVIAAEEAEEQMIARRQVPAGRLRVDAATPFMLHVIVPRVAGFRARYPQVELELDSNEGIVDLIEKRTDVALRIGALKDSSLHARPLGASRLRVLASPAYLRRRGTPAAVEELADHVLLGFNRPETLNTWPLRDASGDSLRVRPDLASSNGETLRQLALAGEGLVCLSDFMTGEDRREGRLVPVLAGQTQDVRQPINAVYYRNTALASRINCFIDYLIEALGPNRFDE*