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SCNpilot_expt_300_bf_scaffold_158_9

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 11013..11564

Top 3 Functional Annotations

Value Algorithm Source
CheW protein; K03408 purine-binding chemotaxis protein CheW id=12494864 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 184.0
  • Bit_score: 346
  • Evalue 1.70e-92
  • rbh
Chemotaxis protein CheW {ECO:0000313|EMBL:KIF83853.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 189.0
  • Bit_score: 232
  • Evalue 3.90e-58
CheW protein similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 230
  • Evalue 3.00e-58

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGTGCGCTAGTCAAAGTGGATGAACGGGCGGGACTGGCTGCGCCGCAGGATCAGCAGCAGTACCTGACCTTCATGCTGGGGGGCGAGACGTTCGCCATCGGCATCCTCGCCATCAAGGAAATCATCGAGTACGGCAATCTCACCGAGGTGCCCATGATGCCGGACTACATCCGCGGGGTGATCAACCTGCGCGGCAGTGTGGTGCCGGTGGTGGATCTCTCCACTCGCTTCGGCCGCAAGAGCACGCAACTCACCCGCCGCACCTGCATCGTCATCATCGAAGTGGCGTCCGATCAGGAGACGCAGGTGGTGGGCGTGGTGGTGGATGCAGTGAACGAGGTGCTGGAAATAGCGCAGGACCAGATCGAACCGCCGCCGGCCTTCGGCGCGAAGATTCGCACCGACTTCATCCGCGGCATGGGCAAGGTAGACGGCAAGTTCGTGATCATCCTGAACGTGGGCAATGTGCTGTCGATCGACGATCTGGCATTGCTGGAACAGGCGGATGCGCAGGGCATGGGATCCGCGAACGAGGCCGCGGCGGAATGA
PROTEIN sequence
Length: 184
MSALVKVDERAGLAAPQDQQQYLTFMLGGETFAIGILAIKEIIEYGNLTEVPMMPDYIRGVINLRGSVVPVVDLSTRFGRKSTQLTRRTCIVIIEVASDQETQVVGVVVDAVNEVLEIAQDQIEPPPAFGAKIRTDFIRGMGKVDGKFVIILNVGNVLSIDDLALLEQADAQGMGSANEAAAE*