ggKbase home page

SCNpilot_expt_300_bf_scaffold_5561_7

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(6295..6927)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=GWA2_Gallionellales_60_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 210.0
  • Bit_score: 316
  • Evalue 3.10e-83
3-isopropylmalate dehydratase small subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUG4_SIDLE similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 210.0
  • Bit_score: 315
  • Evalue 3.80e-83
3-isopropylmalate dehydratase, small subunit similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 210.0
  • Bit_score: 315
  • Evalue 1.10e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Gallionellales_60_18_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGCGTAGCCTGACGGTCCACCGCGGCCTGGTCGCGCCGCTCGATCGAGCGAACGTCGACACCGACGCGATCATTCCGAAGCAGTTCCTGAAGTCGATCAAGCGCAGCGGCTTCGGGCCGAACCTGTTCGACGAATGGCGCTACCTCGATCGCGGCGAACCGGGCATGGACAACAGCCGCCGGCCGCCGAACCCCGATTTCCCGCTCAACCAGGCGCGCTACCGCGGGGCCTCGGTCCTGCTCACGCGCAAGAACTTCGGCTGCGGCTCCTCGCGCGAGCATGCGCCGTGGGCACTGGAAGACTACGGCTTTCGCGTGATCGTGGCGCCGTCGTACGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCCTGCTGCCGATCCGCGTCACTCATGAAGAACTCGAGAAGCTGTTCGACGACGCCGAGCGCGGCGCCAACGCCACGCTGACCATCGATCTGGAGAAGCAGGAAATCCGCGGCCCCGATGGCGGCGTGGTGACGTTCGAGATCGATCCGTTCCGCAAGCACTGCCTGCTCAACGGTCTCGACGATATCGGCCTGACGATGAAGAAAAAGCCATCCATCGATGCCTTCGAGCTGAAGGAAAAGTCCGAGCATCCGTGGCTGTAA
PROTEIN sequence
Length: 211
MRSLTVHRGLVAPLDRANVDTDAIIPKQFLKSIKRSGFGPNLFDEWRYLDRGEPGMDNSRRPPNPDFPLNQARYRGASVLLTRKNFGCGSSREHAPWALEDYGFRVIVAPSYADIFYNNCFKNGLLPIRVTHEELEKLFDDAERGANATLTIDLEKQEIRGPDGGVVTFEIDPFRKHCLLNGLDDIGLTMKKKPSIDAFELKEKSEHPWL*