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SCNpilot_expt_300_bf_scaffold_5565_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(738..953)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L29 n=1 Tax=Afipia birgiae RepID=UPI0002E310FF similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 127
  • Evalue 5.00e-27
rpmC; 50S ribosomal protein L29 similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 2.00e-26
50S ribosomal protein L29 {ECO:0000313|EMBL:AEI07022.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxi similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 9.90e-26

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCGATTTGAAGATTGACGACATCCGCGCGATGAGCCCCGACCAGATGGAGGACGCTATCCTCAATCTGAAGAAGGAGCGCTTCAATCTGCGCTTCCAGCGCGCCACCGGTCAGCTCGAGAACACCTCGCGCCTGCGCGAGGCTCGCCGCGATATCGCACGCATCAAGACTGTCGCCGCGCAGAAGCGCGCCGCCGACAGCAAGAAGAAGTAA
PROTEIN sequence
Length: 72
MADLKIDDIRAMSPDQMEDAILNLKKERFNLRFQRATGQLENTSRLREARRDIARIKTVAAQKRAADSKKK*