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SCNpilot_expt_300_bf_scaffold_5565_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2125..2511)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG06_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 128.0
  • Bit_score: 239
  • Evalue 2.10e-60
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 128.0
  • Bit_score: 239
  • Evalue 2.90e-60
rplV; 50S ribosomal protein L22 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 128.0
  • Bit_score: 236
  • Evalue 5.00e-60

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGAGCAAACCTAAGCGCGAACGGGTTCTCCCGGATAACGAAGCCAAGGCCGTCGCCCGCATGCTGCGGGTCAGCCCGCAGAAGCTCAATCTGGTGGCGCAGCTCATCCGCGGCCGCAGGGCTTCGGCGGCGCTCGCCGACCTGCAGTTCTCGCGCAAGCGGATCGCGGTCGACGTCAAGAAGTGCCTGGAGTCCGCGATTGCGAACGCCGAGAACAACCACGACCTCGATGTCGACGCGCTCGTCGTCGCCGAGGCGCATGTCGGCAACGGCATTGTCATGAAGCGTTTCGCACCGCGCGGCCGTGGCCGTTCGGGCCGTGTATTCAAGCCGTTCTCGCAGCTGACGATCGTTGTTCGTCAGGTCGAGGCGGAGGCGAGCGCTTAA
PROTEIN sequence
Length: 129
MSKPKRERVLPDNEAKAVARMLRVSPQKLNLVAQLIRGRRASAALADLQFSRKRIAVDVKKCLESAIANAENNHDLDVDALVVAEAHVGNGIVMKRFAPRGRGRSGRVFKPFSQLTIVVRQVEAEASA*