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SCNpilot_expt_300_bf_scaffold_6461_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1814..2899)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 361.0
  • Bit_score: 624
  • Evalue 1.80e-176
  • rbh
tRNA pseudouridine synthase B {ECO:0000313|EMBL:AEI04763.1}; EC=5.4.99.- {ECO:0000313|EMBL:AEI04763.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 361.0
  • Bit_score: 624
  • Evalue 9.10e-176
tRNA pseudouridine synthase B n=2 Tax=Oligotropha carboxidovorans RepID=B6JCS0_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 361.0
  • Bit_score: 624
  • Evalue 6.50e-176
  • rbh

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGACCGCGACCGGCCACGACCACGTCAACGCGCCGCAAACCGGCGAGCCGGCGGACACCGGCAAAAATAATTTTTCCGAGCGGTGCTCCGGCGAGAACACGGAGCCGCGCGGCAAACAGCACAAGGGCCAGCGTCAGCAAAAGCGCGAGCGCCGCGACGTCCATGGCTGGGTCGTTCTCGACAAGCCGGTCGGCATGACCTCGACCCAGGCGGTGGCGGTGCTCAAGCGCCTGTTCAACGCCAAGCGCGTCGGCCATGCCGGCACGCTCGATCCGCTCGCCTCCGGCGGGCTGCCCATTGCTCTTGGTGAAGCGACCAAGACCGTGCCGTTCGTGATGGATGGCCGCAAGCGCTACCGGTTCACCGTGCGCTGGGGCGAAGAACGCGACACCGACGACACCGAAGGCCGCGTCACCGCCACCAGCGAGGCCCGCCCCACCCCGGAGGCGATCCAGGCGCTGCTGCCGCAATTCACCGGAACCGTCCTGCAGACTCCGCCGCAATTCTCGGCCATCAAGATCGCCGGCGAGCGGGCCTACGACCTGGCCCGCGACGGCGAGACCGTCGCGCTGCAGCCCCGCCCAGTCGAGATTCACGAATTAATCGTTACGGAACAGCCGGATAGCGACCATTCGGTATTCGAGGCCGAGTGCGGCAAGGGCACCTATGTGCGGGCGCTGGCCCGCGACATGGGCCGCCTGCTCGGCTGCTACGGCCATATCAGCGCCTTGCGCCGGACCCAGTGCGGCCCGTTCGACGAGACCGATATGATTCCGCTGGCGGAATTGGAGGCTTTGTGCGATAGAGCCGCGTCTGGCGAGGGCAGCCTCGCCGACGCGCTTTTGCCCGTTGAGACCGCGCTGGACGACATCCCGGCACTGGCCGTCACACGGGCTGACGCCGCAAGGCTCCACAGGGGCCAGGCGGTTTTGTTGCGCGGACGGGATGCGCCCAATTCCAGCGGCACAGTCTATGTCACTGTCGGAGGAAGGCTTCTGGCCCTCGCCGAGCTTGGCAATGGCGAACTCATCCCCAAGCGCGTGTTCAACCTCACCGGGCTGACTGCCAGTCCGGACCGCAATTAA
PROTEIN sequence
Length: 362
MTATGHDHVNAPQTGEPADTGKNNFSERCSGENTEPRGKQHKGQRQQKRERRDVHGWVVLDKPVGMTSTQAVAVLKRLFNAKRVGHAGTLDPLASGGLPIALGEATKTVPFVMDGRKRYRFTVRWGEERDTDDTEGRVTATSEARPTPEAIQALLPQFTGTVLQTPPQFSAIKIAGERAYDLARDGETVALQPRPVEIHELIVTEQPDSDHSVFEAECGKGTYVRALARDMGRLLGCYGHISALRRTQCGPFDETDMIPLAELEALCDRAASGEGSLADALLPVETALDDIPALAVTRADAARLHRGQAVLLRGRDAPNSSGTVYVTVGGRLLALAELGNGELIPKRVFNLTGLTASPDRN*