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SCNpilot_expt_300_bf_scaffold_6480_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1625..2329

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit TatC n=1 Tax=Afipia birgiae RepID=UPI0002EB2972 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 227.0
  • Bit_score: 389
  • Evalue 2.30e-105
  • rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 235.0
  • Bit_score: 389
  • Evalue 2.40e-105
sec-independent protein translocase protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 223.0
  • Bit_score: 386
  • Evalue 7.10e-105

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
GTGCTGGTGTGGCCGTTCGTCTGGGTCGCCGGGCCGGAAAACTCGAAGTTCATCTATACCGCGCTGCTGGAATACTTCATCACCCAGCTCAAGCTCGCGATGTTCGGCGCGGGCTTCATCTCGTTTCCGATCGTGGCGACGCAAATCTATAAATTCGTGGCGCCGGGCCTCTACAAGCACGAGCGCCACGCCTTCCTGCCGTATCTGCTCGCGACTCCGTTCTTCTTCGTGCTCGGCGCGCTGCTGGTCTATTTCGTCGTGCTGCCGATGCTGATCCGCTTCTCGCTCGGCATGCAGCAGGTCGGCGGCGACGAGACCGCGCAGATCGCGCTGCTGCCCAAGGTCGGCGAATATCTGTCGCTGATGATGTCGCTGATCTTCGCCTTCGGCATCGCCTTCCAGTTGCCGGTGATCCTGACCCTGCTCGGGCGGATCGGCGTCCTGACCGCCAAGCAGCTTCGCGAGAAGCGCCGCTATTTCATCGTCGTTGCCTTTGTGATCGCCGCGGTGCTGACGCCGCCGGACGTCATCAGCCAGGCCTCGCTCGCGATCCCGCTGCTGCTTTTGTATGAAGGCGCGATCATCGCCGTCGGCATGGTGGAGAAGAAGGCCGCCGCGCAGGCGAGCGCTGGCAATCCGCCGGCGAGCCCGCCGACGCCGCCCGAAGCGCCGAGCCCGCCTCCGGCGCTCCCCGCAGCGGAATGA
PROTEIN sequence
Length: 235
VLVWPFVWVAGPENSKFIYTALLEYFITQLKLAMFGAGFISFPIVATQIYKFVAPGLYKHERHAFLPYLLATPFFFVLGALLVYFVVLPMLIRFSLGMQQVGGDETAQIALLPKVGEYLSLMMSLIFAFGIAFQLPVILTLLGRIGVLTAKQLREKRRYFIVVAFVIAAVLTPPDVISQASLAIPLLLLYEGAIIAVGMVEKKAAAQASAGNPPASPPTPPEAPSPPPALPAAE*