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SCNpilot_expt_300_bf_scaffold_4158_7

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(4661..5353)

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQK1_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 226.0
  • Bit_score: 331
  • Evalue 9.50e-88
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 226.0
  • Bit_score: 331
  • Evalue 2.70e-88
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACK52214.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocell similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 226.0
  • Bit_score: 331
  • Evalue 1.30e-87

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
TGCCCCGCGCCGGGCATCTCGTCGGGGCAGGCGCTGTTGGCGATGGATCAGGTGGCGGCCAAGACGCTGCCGCAGGGCTATCAGGGATCGTGGACCGACATCTCGTTCCAGGAGAAGCGCGCCGAAGGCCAGACGCCGGTCATTCTCGCTTTCGCGCTGCTGTTCGCCTACCTGTTCCTGGTCGGCCTGTACGAGAGCTGGACCATCCCGGTGCCGGTGCTGTTGTCGGTCTCAGTCGGCGTCGCCGGCGCCTATCTCGCCATCGTGCTCGCGGGTCTCACGCTCGATCTTTATGCCCAGATCGGCATGGTGGTGCTGATCGGCCTTGCGGCGAAGAACGGCATCCTGATCGTGGCGTTCGCCAAGGAGCGGCGCGAGCACGGCGTGCCGCTGCTCGAAGCCGCGATCGAGGGCTCGCGCCTGCGCTTCAGGCCGGTGATGATGACCTCGTTCGCCTTCATTCTCGGCCTGGTGCCGCTGGTGATCGCAACCGGCGCCTCGAAGCTCGCCTTCCGCAACGTCAGCACGCCGGTGTTCGGCGGCATGCTGGCGGCCTCGTTGATCGGCATCTTCGTGATCCCGGCGCTCTATGTGATGTTCCAGGCGCTCCGCGAGAAACTGAAAGCGAAGATCGGCATGGGGCCTCCGCCGGACGCCGCGCCTGACGAGGTCGCCAAGGCTACGCACGAGTAG
PROTEIN sequence
Length: 231
CPAPGISSGQALLAMDQVAAKTLPQGYQGSWTDISFQEKRAEGQTPVILAFALLFAYLFLVGLYESWTIPVPVLLSVSVGVAGAYLAIVLAGLTLDLYAQIGMVVLIGLAAKNGILIVAFAKERREHGVPLLEAAIEGSRLRFRPVMMTSFAFILGLVPLVIATGASKLAFRNVSTPVFGGMLAASLIGIFVIPALYVMFQALREKLKAKIGMGPPPDAAPDEVAKATHE*