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SCNpilot_expt_300_bf_scaffold_1978_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2282..2899

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ n=2 Tax=Oligotropha carboxidovorans RepID=B6JHZ3_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 205.0
  • Bit_score: 336
  • Evalue 2.60e-89
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 205.0
  • Bit_score: 336
  • Evalue 7.40e-90
Uncharacterized protein {ECO:0000313|EMBL:AEI07159.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 205.0
  • Bit_score: 336
  • Evalue 3.70e-89

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCGTTGCTACAAAGGAAAACGATAATTCACCCGGTCGCCGAGGAACGGCGGCGCTTTCAGCGGGTGAAGGTTCATCTGCTGGGCCGCTACATGCTGTCCGACCGGCGTGAATTCCCCTGCCAGGTGATCAACATGTCGCCCGGCGGGCTGGCCATGCTGGCGCCCGGCATCGGCACCGTCGGCGAGCGCGTCGTCGCCTATCTCGATCATATCGGCCGTGTCGAGGGCAAGATCACCCGCCTGCTCGACAACGGCTTCGCCATGACGGTGGGCGCGACGCCGCGCAAGCGCGAGAAACTGGCCGCCCAGCTCACCTGGCTCGCCAACCGCGAAATTCTCAATTTGCCGGAAGATCGCCGCCACGAGCGCGGCGCGCCGCGCAACGCCAGCGGCTGGCTGAAATTCGAGGACGGCCGGCAGATCCCGTGCCGGATCATCGACCTGTCGCTGTCGGGCGCAGCGATCTCGGCGGAGATCAAACCCGACGTCGGTACGCCCGTGACGCTCGGCCGGGTGCCCGCGCGGGTGATCCGCAAGCTCGAAGAAGGCTTCGCCATCGAGTTCGCTCATCCGCAGTCCGCCGACACAGTCGAAGACAACGTCACCGCCCGGTAA
PROTEIN sequence
Length: 206
MALLQRKTIIHPVAEERRRFQRVKVHLLGRYMLSDRREFPCQVINMSPGGLAMLAPGIGTVGERVVAYLDHIGRVEGKITRLLDNGFAMTVGATPRKREKLAAQLTWLANREILNLPEDRRHERGAPRNASGWLKFEDGRQIPCRIIDLSLSGAAISAEIKPDVGTPVTLGRVPARVIRKLEEGFAIEFAHPQSADTVEDNVTAR*