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SCNpilot_expt_300_bf_scaffold_2447_9

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4568..6475

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037CEEF7 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 622.0
  • Bit_score: 849
  • Evalue 2.80e-243
  • rbh
TonB-dependent receptor protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 589.0
  • Bit_score: 818
  • Evalue 1.50e-234
TonB-dependent receptor protein {ECO:0000313|EMBL:AEI07067.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha c similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 589.0
  • Bit_score: 818
  • Evalue 7.60e-234

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGACTTCCACTCTTCCGATCCGGACTCTTCCGATCCGGCACGGCGCCGGCATTGCCGCGTTGGCCGGGGCGTTGCTGTCGAGCGCCGCGCTGACCGCGCCGGCTTTCGCGCAGCAGAACCAGACCTCGCTGCCGACCATCAATGCCGATGCCAGCCGCCTTTCCAGCATCGACATCATCGGCGCTTCAACCAGCGTGATCACCGCCGAGGACATCGCCCGTTCGCCGGGCCAGACCGTGCAGGACGTGCTGGCGACGGTTCCGGGCGTGCAGCTCACGAGTCTCTATGGCGGCATCAACGGCGCTCGAACGACGGTCGACCTGCGCGGCTTCGGTGCTTTCGCCGCCCAGAACACGCTGGTGCTGATCAACGGCCGCCGCGTCAACGATCTCGACATTCAGGGGGTCGATCTGTCGCGCATCCCGCTGAATTCGGTCGAACGCATCGAGGTGACGCGCGGCAACAGCGGCGCGGTGCTCTACGGCGATAACGCAGTCGGCGGCGTCATCAACATCGTGACCAAGACCGGCGCGAGCGGCGGCAAACCGATGGCGATGACCATCGAGACCGGCGTCGGCTCGTTCAATCAGAAGCTTGCCAATTTCTCGGCCACCACCAATTACGGTCCGTGGTCCACTGCCGCTTTTGCCAACACCATCCAGTCCGACGGCTACCGCGCCAACAACCGGCTCAACCAGCAGAACATGACCGGCGAGGTTCGCTATACCACGCCGGATTTCAGTGCGTTCTTCAACCTCGCGGGTGACAACCAGCGCCTCGGCCTGCCGGGCTACCGCTCGACGAAATACTATCTCGACGGCGTCAACCAGCTCGCCACCGACCCGCGCGGCACGGTGACACCGTACGACTATGCCAACCAGCAGGGCATCAACGCCACCACCGGCTTCACCAAGACGCTGTGGACCGGCGCGGAGCTGATCGTCGATGGCGGCCTGCGCAGCAAGAAGCAGCAGGCGAATTTCTACGACGACCCGCGCGCGCCCTATCCGCGCTATGTCGACAGCACGCTGCAGACATGGTCGATCACGCCGCGCCTGAGCATGAAGAACAGGTTCTTCGGCATGACCTCCAATGTGCTGACCGGCATCGACTACTACAACGCCGGTTATGATTCCGACCGCAGCCAGTGGATCGGGGTGGCGCCGATCCACGCCTACCATCTCAATCAGGAGACACTGGCAGGCTATTGGCAGCACACCGTCGGCCTGCTGCCGAGCACCGACGTCTCTTATGGCGGCCGCATCCAGCGCACCAGCCTCGACGCGCGAGACGTGCTGAATCTTGCCGCGCCCGGCGCTGCGCCCTGGGATACGGCGCATGTGCCGCTGAACACCAACGAAACCAATCATGCCTGGCATGTCGGCATCGAGCATCGCTTCAACGACGTCTTCGCAGTGTTCGGCCGTGCCGCCAACGCATTCCGCACGCCGAATGTGGACGAACGCATCGGCGTGGGACCGGACGCCAACGGCAACGCCAACTTCAATCTCAGGACGCAGACATCGCGCGACCTCGAAGCCGGCTTCCGGATTCGCGGCCGCGATTTCGAATTGCAGACCAGCTTCTTCGACATGCGGCTGAAGAACGAGGTCCATTTCGATCCTGTGTCTTTCATAAACCGCAACCTCGATCCGACCCACCGCTACGGATCGGAGACCAGCGCCACGCTGCGCGTCAACGATTCCGTCCGGCTGAAAGGCGGCTTTGCCTATACCCGCGCGGTGTTCAGCGAGGGGCAGTTCGCCGGCAATGACGTTCCGCTGGTCTCGCGGCTCACGGGAAGCGCCGGCGTGTCATGGGATGTCTGGCAGAAATATCTGACGCTCGACGTCGGGGTCCGTGCCTGGGGCAACCGCCGCATGGATAACGATCAGGCCAACTTCTAG
PROTEIN sequence
Length: 636
MTSTLPIRTLPIRHGAGIAALAGALLSSAALTAPAFAQQNQTSLPTINADASRLSSIDIIGASTSVITAEDIARSPGQTVQDVLATVPGVQLTSLYGGINGARTTVDLRGFGAFAAQNTLVLINGRRVNDLDIQGVDLSRIPLNSVERIEVTRGNSGAVLYGDNAVGGVINIVTKTGASGGKPMAMTIETGVGSFNQKLANFSATTNYGPWSTAAFANTIQSDGYRANNRLNQQNMTGEVRYTTPDFSAFFNLAGDNQRLGLPGYRSTKYYLDGVNQLATDPRGTVTPYDYANQQGINATTGFTKTLWTGAELIVDGGLRSKKQQANFYDDPRAPYPRYVDSTLQTWSITPRLSMKNRFFGMTSNVLTGIDYYNAGYDSDRSQWIGVAPIHAYHLNQETLAGYWQHTVGLLPSTDVSYGGRIQRTSLDARDVLNLAAPGAAPWDTAHVPLNTNETNHAWHVGIEHRFNDVFAVFGRAANAFRTPNVDERIGVGPDANGNANFNLRTQTSRDLEAGFRIRGRDFELQTSFFDMRLKNEVHFDPVSFINRNLDPTHRYGSETSATLRVNDSVRLKGGFAYTRAVFSEGQFAGNDVPLVSRLTGSAGVSWDVWQKYLTLDVGVRAWGNRRMDNDQANF*