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SCNpilot_expt_300_bf_scaffold_2976_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 227..886

Top 3 Functional Annotations

Value Algorithm Source
LemA family protein n=1 Tax=Afipia birgiae RepID=UPI0002F7763D similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 219.0
  • Bit_score: 373
  • Evalue 1.60e-100
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34198.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 209.0
  • Bit_score: 360
  • Evalue 1.50e-96
LemA family protein similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 219.0
  • Bit_score: 353
  • Evalue 3.70e-95

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGGAAGTTATGGACGGTTCTCGCGGCGTTGGCGACGCTCAGCCTGACCAATTGCGGCTACAACGTCATCCAGCAGAACGACGAGGCGGTGAAATCGAGCTGGTCCGAAGTCGTCAACCAGTATCAGCGCCGCGCCGATCTGGTGCCCAATCTCGTCAACTCGGTGAAAGGCTTCGCCCAGCAGGAGAAAGACGTGCTGCTCGGCGTCACCAATGCCCGCGCCAAGGTCGGCAGCACCCAGATCTCGCCCGATGTGATCAACGATCCGGCAGCCTTGCAGAAATTTCAGGCCGCGCAGGGCGAACTCACCAGTGCGTTGTCACGCTTGCTGGTGGTGACCGAGAACTATCCGCAGCTCAAATCCGATCAACTTTTCCGCGATCTCGTCGCGCAGCTCGAGGGCACGGAAAACCGCATCGCGGTCGCGCGCAACCGCTATATCAAGGCGGTGCAGGACTACAACGTCGACATCCGAACCTTTCCGAACAACCTGACCGCGATGCTGTTCGGCTACAAGGAAAAGGCCAATTTCACGGTGGAGAACGAGAAGTCGATCTCGACCGCGCCGAAGGTGGATTTCAACGTTCCGGCGACGCCTGCACCTGCACCGGCCCCCGCACCGGCTCCCGCCACGCCGGCGCCAGAGCCCGCCAAGTAG
PROTEIN sequence
Length: 220
MRKLWTVLAALATLSLTNCGYNVIQQNDEAVKSSWSEVVNQYQRRADLVPNLVNSVKGFAQQEKDVLLGVTNARAKVGSTQISPDVINDPAALQKFQAAQGELTSALSRLLVVTENYPQLKSDQLFRDLVAQLEGTENRIAVARNRYIKAVQDYNVDIRTFPNNLTAMLFGYKEKANFTVENEKSISTAPKVDFNVPATPAPAPAPAPAPATPAPEPAK*