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SCNpilot_expt_300_bf_scaffold_2976_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3546..3803

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q216D6_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 85.0
  • Bit_score: 148
  • Evalue 2.50e-33
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ETR76103.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 85.0
  • Bit_score: 149
  • Evalue 2.00e-33
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 85.0
  • Bit_score: 148
  • Evalue 6.90e-34

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGACGCTGCCGATCGCGCGCGATCTCGCCTCGCTGCTGATCCGGGTTAACAGCATCGCGCCGGGGCTGTTTCTGACGCCGCTGCTGCTCGGTCTGCCGGAGGAGGCGCAGCGCAGCCTCGCCACCCAGGTTCCGCATCCCTCGCGTCTCGGCGATCCGAGGGAATACGCCGCGCTGGCCGTCCACATCGTGGAGAACCCGATGCTGAACGGCGAGACCATCCGCCTCGACGGGGCCATCCGCATGGCGCCGCGCTAG
PROTEIN sequence
Length: 86
MTLPIARDLASLLIRVNSIAPGLFLTPLLLGLPEEAQRSLATQVPHPSRLGDPREYAALAVHIVENPMLNGETIRLDGAIRMAPR*