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SCNpilot_expt_300_bf_scaffold_5967_8

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4462..5325

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein OCA5_c13510 n=2 Tax=Oligotropha carboxidovorans RepID=B6JGE8_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 288.0
  • Bit_score: 493
  • Evalue 1.10e-136
  • rbh
ATP-dependent DNA helicase similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 288.0
  • Bit_score: 492
  • Evalue 8.60e-137
DNA helicase, ATP-dependent, Ku type {ECO:0000313|EMBL:AEI06067.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotro similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 288.0
  • Bit_score: 492
  • Evalue 4.30e-136

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
GTGGCGCCGCGAGCGAACTGGAAGGGATTTCTGCGTCTGTCGCTGGTCACCTGTCCGATCGCCCTCTATCCGGCGACCTCCGAGACCGAGAAGATCAGCTTCAACCAGATCAACAAGAACACCGGCCACCGTATCAAATACAGCAAGGTCGATGCCGAGACCGGCGAAGAGGTCGAGCCCGAGGATATCGTCAAGGGCTACAAGGTCGACACCGACACCTACATCGAAGTCAGCAAGGACGAGCTCGACAACATCGCACTCGAGTCCACTCACACCGTCGACATCGACGAGTTCGTGCCGCGCGACGAGATCGACAACCGCTTCCTGATCCGCCCTTATTATATCGTGCCCGACGGCAAGGTCGGCCACGACGCCTATGCGGTGATCCGCGAGACCATCCGTACCATGGACATGGTCGCGCTCGGCCGCATCGTGCTGACCAATCGCGAGCACATCATCGCGCTGGAGCCGCTGGACAAAGGCATCGTCGGCACGCTGCTGCGCTATCCCTACGAGGTGCGGGAGGAGAGCGCCTATTTCGACGACATCAAGGATGTCAAAGTCACCAAGGAGATGCTCGATCTCGCCAAGCACATCGTCGAGACCAAGACCACCGATTTCGATCCGAAGCATTTCGAGGATCATTACGAGGCGGCGCTGACCGACCTCATCAATCGCAAGCGCAACGGCGAGACAATCAAGGCGCCCGCGCCGCGCAAGCAGGGCAACGTCATCAACCTGATGGATGCGCTGCGCGAGAGTCTCAAGGGCGAGACGAAAACCGCGCGCCGCCCGGCCCGCGCGCCGCAGCGCGCCACCAAGAAAGCAACCCACTCCAAGGCGCGGCAGCGCAAGGCAAGTTGA
PROTEIN sequence
Length: 288
VAPRANWKGFLRLSLVTCPIALYPATSETEKISFNQINKNTGHRIKYSKVDAETGEEVEPEDIVKGYKVDTDTYIEVSKDELDNIALESTHTVDIDEFVPRDEIDNRFLIRPYYIVPDGKVGHDAYAVIRETIRTMDMVALGRIVLTNREHIIALEPLDKGIVGTLLRYPYEVREESAYFDDIKDVKVTKEMLDLAKHIVETKTTDFDPKHFEDHYEAALTDLINRKRNGETIKAPAPRKQGNVINLMDALRESLKGETKTARRPARAPQRATKKATHSKARQRKAS*