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SCNpilot_expt_300_bf_scaffold_5968_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2413..2904)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase HrpB n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H47_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 162.0
  • Bit_score: 294
  • Evalue 5.30e-77
ATP-dependent helicase HrpB similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 162.0
  • Bit_score: 294
  • Evalue 1.50e-77
ATP-dependent helicase HrpB {ECO:0000313|EMBL:ABJ08737.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudom similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 162.0
  • Bit_score: 294
  • Evalue 7.50e-77

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GAATGGCCCGATCTGTCCGACGCTGCGCTAATCGCCGGCCGGCAGGACTGGCTGGCACCGGCACTGCTCGACAAGACCGCGCTGGCGGATGTGTCGGCCGGCGAATTCTCTGACGCGCTGATGGCGCTGGTACCGTGGAGCCATCGCGCGCAACTCGACCGCGAGGCGCCGACGCATTTCGAAGCGCCGACCGGCACCCAGCTTGCGATCGACTACGAGGCCGAGCAGGGGCCGACCATCGCCGTGCGGCTGCAGGAACTGTTCGGGCTGACGGTGCATCCCTCGATCGCGCGCGGAAAGATTCCGCTGGTGCTGGAATTGCTGTCGCCCGCGCATCGCCCGGTGCAGGTCACCCGCGATCTGCCGGGCTTCTGGCGCGGCTCCTATGCCGGCGTCCGCGCCGACCTGCGCGGCCGCTATCCGCGCCATCCCTGGCCGGAGGATCCGGCGAGTGCGCCGCCGACCCGCCGCGTCAAGCCGCGCGGAACCTGA
PROTEIN sequence
Length: 164
EWPDLSDAALIAGRQDWLAPALLDKTALADVSAGEFSDALMALVPWSHRAQLDREAPTHFEAPTGTQLAIDYEAEQGPTIAVRLQELFGLTVHPSIARGKIPLVLELLSPAHRPVQVTRDLPGFWRGSYAGVRADLRGRYPRHPWPEDPASAPPTRRVKPRGT*