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SCNpilot_expt_300_bf_scaffold_5998_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(74..1243)

Top 3 Functional Annotations

Value Algorithm Source
Mandelate racemase/muconate lactonizing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6U3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 389.0
  • Bit_score: 766
  • Evalue 1.50e-218
  • rbh
L-fuconate dehydratase {ECO:0000313|EMBL:CEG09595.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch dis similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 389.0
  • Bit_score: 766
  • Evalue 2.10e-218
mandelate racemase/muconate lactonizing domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 389.0
  • Bit_score: 754
  • Evalue 1.30e-215

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGACCGTCCGCATCGTCGATATCCGCGAAGTCACCAAGCCGATCGCCTCGCCGATCCGCAATGCCTATATCGATTTCTCCAAGATGACCTCCAGCCTCGTCGCGGTGGTCACCAATGTGGTGCGCGACGGCAAGACCGTGGTCGGCTACGGCTTCAATTCCAACGGCCGTTACGGGCAGGGCGGCCTGATCCGCGAGCGTTTCGCCCGGCGCGTGCTGGAGGCCGATCCGGCATCGCTGCTCGATGCGAGCGGCGACAATCTCGATCCGCACAGAGTGTGGGCGACGCTGATGACCAACGAGAAGCCGGGCGGCCATGGCGAGCGCTCGGTCGCGGTCGGTACCATCGACATGGCGGTGTGGGACGCGGTGGCGAAGATCGCCGGCAAGCCGCTGTTTCGTTTGCTCGCCGAGCGGCACAAGCGCGAGGCCAATCCGCGCGTGTTCGTCTATGCCGCGGGCGGCTATTATTATCCGGGCAAGGACAATTCGGCGCTGCGCGCGGAGATGCGCGGCTATCTCGACCGCGGCTACAATGTCGTGAAGATGAAGATCGGCGGCGCGCCGCTGGAAGAGGACCGTATCCGCATCGAGGCGGTGCTCAAGGAGATCGGCAGCCAGGCGCAGCTCGCGGTCGACGCCAATGGCCGCTTCGATCTGGAGACCGGCATCGCCTACGCCAAGATGCTGCGTGATTATCCGCTGTTCTGGTACGAGGAGGTCGGCGATCCGCTGGATTTCCAGTTGCAGGCGGCGCTGGCCGAATTCTATCCGGGCCCGATGGCGACCGGCGAAAACCTGTTCAGCCATCAGGATGCGCGCAATCTGATCCGCTATGGCGGCATGCGTCCTGACCGCGACTATTTGCAGTTCGACTGTGCGCTGTCCTACGGGCTGGTCGAATATCTGCGTACGCTTGAGGTGCTGCGCACCCATGGCTGGTCGCCGGCGCGCTGCATTCCGCATGGCGGCCATCAGATGTCGCTCAACATCGCGGCCGGTCTCGGCCTTGGCGGCAATGAGAGTTACCCCGATCTGTTCCAGCCCTATGGCGGCTTCCCCGACGGCGTGCGGGTCGAGAACGGCCACATCACCATGCCGGATCTGCCGGGCATCGGCTTCGAGGGCAAATCCGATCTCTACAGGGAGATGAAGGCGCTGGCGTCGTAA
PROTEIN sequence
Length: 390
MTVRIVDIREVTKPIASPIRNAYIDFSKMTSSLVAVVTNVVRDGKTVVGYGFNSNGRYGQGGLIRERFARRVLEADPASLLDASGDNLDPHRVWATLMTNEKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERHKREANPRVFVYAAGGYYYPGKDNSALRAEMRGYLDRGYNVVKMKIGGAPLEEDRIRIEAVLKEIGSQAQLAVDANGRFDLETGIAYAKMLRDYPLFWYEEVGDPLDFQLQAALAEFYPGPMATGENLFSHQDARNLIRYGGMRPDRDYLQFDCALSYGLVEYLRTLEVLRTHGWSPARCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVENGHITMPDLPGIGFEGKSDLYREMKALAS*