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SCNpilot_expt_300_bf_scaffold_5370_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4393..6333

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1A n=1 Tax=Afipia birgiae RepID=UPI0002D9E712 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 647.0
  • Bit_score: 1068
  • Evalue 0.0
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS33272.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevel similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 652.0
  • Bit_score: 1054
  • Evalue 0.0
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 646.0
  • Bit_score: 1014
  • Evalue 1.50e-293

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGGCGGGACGGAAGAAAGCAGGCGGACGCCGGGAGCCGAAGTTCGACGACGGCGCCTCGCTGGATGGCATCCGGCTCAATCCGTGGGATCGCGTCGGCGGCCCGGAGGATGACGCCGACGCCACGCCGAAGCGCCGCGCGCCCAAGCGTGCCGCCGATGACACCGCCTCGCGCGGTTCCCGGAAGAGCCGCGCACAGGCGAAAAAAGACAAAAGAGAGAACAACAAGGCCGCGCGCGGCAAGGCGCGCAGCAGGCTGGGCCGGGTGCTTTACTGGGGCCTGGTGCTGAGCCTGTGGGCCGTCATCGCCGGCGTCGGCGTCGTGGTCTGGGTCGGCGCACATCTGCCTTCGATTCAATCGCTGGAAATTCCCAAGCGTCCGCCGACCATCCAGATCGTCGGCATCGACGGCAGCGTGATCGCAACGCGCGGCGAGATGCCCGGCGCGAATGTTCCGCTCAAGGAACTGCCGCCCTATCTGCCGAAAGCTTTCATCGGGATCGAGGACCGCCGCTTCTATTCGCATTTCGGCATCGATCCGATCGGCATCGCCCGCGCCGCCGCGACCAACCTGCTGCATCGCGGCGTGTCGCAAGGCGGCTCGACCCTGACCCAGCAGCTTGCCAAGAACCTGTTCCTGACCCAGGAGCGCACCTTGCAGCGCAAACTGCAGGAAGCCGAGCTCGCGCTGTGGCTGGAGCGGAAATACTCCAAGAACGAAATTCTCGAGCTCTATCTCAACCGCGTCTATTTCGGCTCCGGCGCTTACGGCGTGGAAGCGGCCGCACAGAAATATTTCGGCAAATCGGCGCGCGCCGTCACCCTCGCGGAGGCGGCGATGCTCGCGGGCCTCGTCAAATCGCCGTCACGCCTCGCGCCGAACCGCAACCCGGAAGGCGCGGAAAAGCGGGCGCAGACCGTGCTCGGCGCGATGGCGGATGCAAAATTCATCACCGACGCGCAGGCGCAGGCCGCGATCGGCCATCCGTCCTACGCGGTGAAGCCGGTCGGCGCCGGCACCGTCAATTATGTCGCCGACTGGATCGGCGAGGTGCTCGACGATCTGGTCGGACAGGTCGAGCAGAATATCGTGGTCGAGACCTCGATCGATCCGAAGTTGCAGGCCGTCGCGGAAGCCGCGGTGATCGACGAACTCGCGGCCAAGAGCGTGAAGTTCAAGGTCAGCCAGGGCGCGCTGGTGGCGATGACGCCGGACGGCGCGGTGCGCGCGATGGTCGGCGGGCGCAACTACTCGGAGAGCCAGTTCAACCGCGCGGTCACCGCCAAGCGTCAGCCCGGTTCGGCCTTCAAGCCGTTCGTCTATCTCACCGCGCTGGAAATGGGCCTGACGCCCGACACCGTGCGGCAGGACGCTCCACTCGAGATCAAGGGCTGGAAGCCGGAGAACTACAGTCACGAATATTTCGGCCCGGTGACGCTGACGCAGGCGCTGGCGATGTCGCTCAACACCGTGGCGGTGCGGCTCGGCATCGAGGTCGGCCCGGCCAATGTGGTGCGCACCGCGCACCGGCTCGGCATCGCCTCCAAGCTCGAAGCCAATCCGTCGATCGCGCTCGGCACCTCGGAAGTCTCGCTCACCGAACTCGTCGGCGCCTATGCCCCGTTCGCCAATGGCGGCACCGCGGCCTCGCCGCATGTCATCAACCGCATCAAGACCGCCGGAGGCAAGCTGCTGTACGCGCGCAAGTCCGATCCGGCCGCGCAGGTGATCGACCCGCGCTATGTCGGCATGATGAACGCGATGATGCATGAGACGCTGGTCATCGGCACGGCGAAGAAGGCCGACATTCCCGGCTGGTACGCCGCCGGCAAAACCGGCACCAGCCAGGATTTCCGCGACGCCTGGTTCGTCGGCTACACCGCCAATCTGGTCACCGGCATCTGGTTCGGCAATGACGACAACTCACCGACCCACAAGGCC
PROTEIN sequence
Length: 647
MAGRKKAGGRREPKFDDGASLDGIRLNPWDRVGGPEDDADATPKRRAPKRAADDTASRGSRKSRAQAKKDKRENNKAARGKARSRLGRVLYWGLVLSLWAVIAGVGVVVWVGAHLPSIQSLEIPKRPPTIQIVGIDGSVIATRGEMPGANVPLKELPPYLPKAFIGIEDRRFYSHFGIDPIGIARAAATNLLHRGVSQGGSTLTQQLAKNLFLTQERTLQRKLQEAELALWLERKYSKNEILELYLNRVYFGSGAYGVEAAAQKYFGKSARAVTLAEAAMLAGLVKSPSRLAPNRNPEGAEKRAQTVLGAMADAKFITDAQAQAAIGHPSYAVKPVGAGTVNYVADWIGEVLDDLVGQVEQNIVVETSIDPKLQAVAEAAVIDELAAKSVKFKVSQGALVAMTPDGAVRAMVGGRNYSESQFNRAVTAKRQPGSAFKPFVYLTALEMGLTPDTVRQDAPLEIKGWKPENYSHEYFGPVTLTQALAMSLNTVAVRLGIEVGPANVVRTAHRLGIASKLEANPSIALGTSEVSLTELVGAYAPFANGGTAASPHVINRIKTAGGKLLYARKSDPAAQVIDPRYVGMMNAMMHETLVIGTAKKADIPGWYAAGKTGTSQDFRDAWFVGYTANLVTGIWFGNDDNSPTHKA