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SCNpilot_expt_300_bf_scaffold_6128_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2863..3627)

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system protein TadC n=2 Tax=Bradyrhizobiaceae RepID=F7QIS7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 254.0
  • Bit_score: 435
  • Evalue 3.90e-119
Uncharacterized protein {ECO:0000313|EMBL:EKS32572.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 254.0
  • Bit_score: 435
  • Evalue 5.50e-119
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 254.0
  • Bit_score: 427
  • Evalue 3.00e-117

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
CGGCAGACGCCGAAACAGCTGGTCGGCCGCATCGTCGAGGACTTCAACCTCAGCAAATGGCTGGCGCAGGAAGAGGCCCGCGACAAGCTGGTGATGGCCGGCTATCGCGGCCAGGCGCCCTACATCACCTTCCTGTTCTTCCGCATGGTGATGCCGATCGTGTTCCTGGCCGGCTCGGCGCTCTACATCTTCGTCATCACCCATATGGACCGGCCGCTGGTGACGAAGCTCGCGATCTGCCTCGTCGCGGCCTGGGTCGGCATGCAGGCGCCGATGCTGTTCCTCAAGAACGCCATCAAGAAGCGGCAGCTCTCGATCAAGCGCGCCTTTCCCGATGCGCTCGACCTGCTCCTGATCTGCATCGAGTCCGGCATGTCGATCGAGGCCGCGTTCCGCAAGGTCAGCCAGGAGATCGGTTCGCAGTCGGTGCCGCTGGCCGAGGAATTCACGCTGACCACGGCGGAACTGTCCTATCTGCAGGACCGCAAGCAGGCCTACGAGAACCTGCAGAAGCGCACCGGCCTCGAAGGCGTCAAGTCGGTCTGCCTCGCCTTGCAGCAGTCCGAGCGTTACGGCACGCCGCTTGGCCAGACGCTGCGGGTGATGGCGCAGGAAAACCGCGACATGCGCATGAACGAGGCAGAGAAGAAGGCCGCCGGCCTGCCGCCGAAGCTGACGGTGCCGATGATCGTGTTCTTCCTGCCGGTGCTGTTCGTGGTGATCCTCGGCCCGACCGGCATCAAGGTCTCCGCCTATATGAATTGA
PROTEIN sequence
Length: 255
RQTPKQLVGRIVEDFNLSKWLAQEEARDKLVMAGYRGQAPYITFLFFRMVMPIVFLAGSALYIFVITHMDRPLVTKLAICLVAAWVGMQAPMLFLKNAIKKRQLSIKRAFPDALDLLLICIESGMSIEAAFRKVSQEIGSQSVPLAEEFTLTTAELSYLQDRKQAYENLQKRTGLEGVKSVCLALQQSERYGTPLGQTLRVMAQENRDMRMNEAEKKAAGLPPKLTVPMIVFFLPVLFVVILGPTGIKVSAYMN*