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SCNpilot_expt_300_bf_scaffold_7485_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..300

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 161
  • Evalue 9.20e-38
ATP dependent DNA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133M6_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 161
  • Evalue 3.30e-37
ATP dependent DNA ligase {ECO:0000313|EMBL:ABE40713.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 161
  • Evalue 4.60e-37

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTCGACAACCCGGAGCGCTATCTGCTCAACATGTCGAAGAAGCAGCGCAAGGGCAAAATTTTCCTCGACTACCTGCGCAACGACCGGATGTCGACGGCGGTGGCGCCGCTCTCGCCCCGCGCGCGCGAAGGCGCGACGGTGTCGATGCCGCTCACATGGGCGCAGGTGCGCCGCGGGCTCGATCCGAAGACCTACACGATACGAACGGCGCCGGCGCTGCTCAGAAAATCGAAAGCGTGGGCGGACTATGATCGCGCGGCGCGTTCGCTGAAAGCGGCGATGGCAAAACTCAAAATGTGA
PROTEIN sequence
Length: 100
VDNPERYLLNMSKKQRKGKIFLDYLRNDRMSTAVAPLSPRAREGATVSMPLTWAQVRRGLDPKTYTIRTAPALLRKSKAWADYDRAARSLKAAMAKLKM*