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SCNpilot_expt_300_bf_scaffold_6992_5

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2726..3337)

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V596_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 203.0
  • Bit_score: 362
  • Evalue 2.60e-97
Hopanoid biosynthesis associated RND transporter like protein HpnN {ECO:0000313|EMBL:CEG08543.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 203.0
  • Bit_score: 363
  • Evalue 2.10e-97
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 203.0
  • Bit_score: 359
  • Evalue 6.20e-97

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACCGCCGACGGCCGCGTGCGCGTCAAGGCGCAGCCGAAGGGCGATCCGAACGACAACGATACGCTGCGGGCTTTTGCCGCCGCCGTGCAGAAGGTCGAGCCGAACGCGACCGGCGGTCCGATCTCGATTCTGGAATCGGGCCACACCATCGTGATGGCCTTCATCCAGGCTGGCGGCTGGGCACTGCTGTCGATCTCGATCCTGCTCTACATTGTGCTGCGCCGGATCGGCGACGTGCTGCTGACGCTGGTGCCGCTGATTCTCGCCGGCGTGGTGACGCTGGAAATCTGCGTGCTGATCGGTCTGCCGCTGAACTTCGCCAACATCATCGCGTTACCGCTACTGCTCGGCGTGGGCGTGGCGTTCAAGATCTACTACGTCACCGCATGGCGGGCGGGGCACACCAACCTGCTGCAATCGAGTCTGACCCGGGCGATCTTCTTCAGTGCGATGACCACGGCCACCGCCTTCGGCAGCCTGTGGCTGTCGAGCCATCCGGGCACGTCGAGCATGGGCAAGCTGATGGCGCTGTCGCTGGTGACGACGCTCGCCGCAGCGGTGCTGTTTCAGCCCGCGCTAATGGGCCGCCCCCGCGATCTCGGGAAGTAG
PROTEIN sequence
Length: 204
MTADGRVRVKAQPKGDPNDNDTLRAFAAAVQKVEPNATGGPISILESGHTIVMAFIQAGGWALLSISILLYIVLRRIGDVLLTLVPLILAGVVTLEICVLIGLPLNFANIIALPLLLGVGVAFKIYYVTAWRAGHTNLLQSSLTRAIFFSAMTTATAFGSLWLSSHPGTSSMGKLMALSLVTTLAAAVLFQPALMGRPRDLGK*