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SCNpilot_expt_300_bf_scaffold_8382_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1646..2107)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein SmpA n=1 Tax=Afipia birgiae RepID=UPI000312BC9D similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 137.0
  • Bit_score: 232
  • Evalue 3.10e-58
Uncharacterized protein {ECO:0000313|EMBL:EKS38295.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 137.0
  • Bit_score: 232
  • Evalue 4.30e-58
SmpA/OmlA protein similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 148.0
  • Bit_score: 225
  • Evalue 8.00e-57

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCAAGAGGATAGCCCCTTTGGCCGAGATGATCGTGAGCCCCGACGCCTCGTGGCGGCCGCGCTTGCGGTCTGCGCCGTGCTCGGCGGCTGCACCGGCGAGCAGTTCCAGAAGGGCTACATCCTGCCGGCCGGCGCGCTCGAGCAGATCCCGCTCGGCGCCAGCCAGGACCAGGTGCTGATCGTGATGGGCACGCCCTCCACGGTCGCGACGCTGAACGGCGAGGTGTTCTACTACATCTCGCAGCGCACCGAGCGCAAAGTCGCCTTCATGCGCCAGCAGGTGATCGACCAGCGCGTGATCGCAATCTATTTCGACAAGGATCGCCGGGTGCAGCGCATCGCCAATTACGGCCTCAGGGACGGCCGCATCTTCGACTTCATCACGCGCACCACGCCGACCAGCGGTCAGGAGCTCTCCTACCTGACGCCGCTGTTCAAGATCCTCAGCACGCGGGATTAG
PROTEIN sequence
Length: 154
MQEDSPFGRDDREPRRLVAAALAVCAVLGGCTGEQFQKGYILPAGALEQIPLGASQDQVLIVMGTPSTVATLNGEVFYYISQRTERKVAFMRQQVIDQRVIAIYFDKDRRVQRIANYGLRDGRIFDFITRTTPTSGQELSYLTPLFKILSTRD*