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SCNpilot_expt_300_bf_scaffold_8415_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1..270)

Top 3 Functional Annotations

Value Algorithm Source
RND superfamily transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0B7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 90.0
  • Bit_score: 146
  • Evalue 1.70e-32
Efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family {ECO:0000313|EMBL:CEG10399.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 90.0
  • Bit_score: 146
  • Evalue 2.40e-32
RND superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 90.0
  • Bit_score: 134
  • Evalue 1.10e-29

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACCGCGCCAGACCCTCACGATGCCGATGTCTCCGCGAGCGGGCGTGCTCGTTTCAGTATCGCGTTCGGTCTGGAGCGTATCGGGCTGGTGGCGATGCGGGCGCCGATCCTCTCGCTGTGCATCCTGGTCGCGTTGTGCGTGGCGGCTTTCTTCGGCCTGCAGCGCATCAAGGTCGACGATTCGCTGAGCCAGCTGTTCCGCTCCGACACGCCGGAATACAAGCAGTACGAGGAAGCCACCAAGCGCTTCCCGTCGAGCGAATACGAT
PROTEIN sequence
Length: 90
MTAPDPHDADVSASGRARFSIAFGLERIGLVAMRAPILSLCILVALCVAAFFGLQRIKVDDSLSQLFRSDTPEYKQYEEATKRFPSSEYD