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SCNpilot_expt_300_bf_scaffold_11106_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1592..2017)

Top 3 Functional Annotations

Value Algorithm Source
porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 140.0
  • Bit_score: 223
  • Evalue 3.70e-56
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 140.0
  • Bit_score: 223
  • Evalue 1.80e-55
Hydroxymethylbilane synthase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07S27_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 140.0
  • Bit_score: 223
  • Evalue 1.30e-55

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGGCGCGCTCGGGTCTCGAGCGCGTCGGCCTGATTGAGCGCATGGTGCATGCGTTCACGCCGCAGGAAATGCTGCCGGCGGCGGGGCAGGGTATCGTCGCGGTGGAGTGCGCCGCACATGACTGGCAGACCCGCGGCCTGCTCGCGACCATCGACGATCCGGTATCGCGCGCCAGCGCCGAGGCCGAGCATGAAGTGCTGTGGGTGCTCAACGGCCATTGCAATTCGCCGATCGCCGCGTTCTCCACCATCGAGGGATCGGTGATGTCGCTCACCGCCTCGGTGCTCGACGAGGCCGGCGACCGCTTCATCGAGGCGACACGGACCGGGCCTGCGGACCGTCCGCGCGAACTTGGCCGCGCCGTGGCAATGGATCTGCTGGGCAAGGGCGCGGCGGCGATCATCGAACGCACCCGGCCGGTGTGA
PROTEIN sequence
Length: 142
MARSGLERVGLIERMVHAFTPQEMLPAAGQGIVAVECAAHDWQTRGLLATIDDPVSRASAEAEHEVLWVLNGHCNSPIAAFSTIEGSVMSLTASVLDEAGDRFIEATRTGPADRPRELGRAVAMDLLGKGAAAIIERTRPV*