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SCNpilot_expt_300_bf_scaffold_11714_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2237..2839

Top 3 Functional Annotations

Value Algorithm Source
CarD family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0003788C68 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 200.0
  • Bit_score: 359
  • Evalue 1.70e-96
Uncharacterized protein {ECO:0000313|EMBL:EKS33652.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 199.0
  • Bit_score: 355
  • Evalue 4.40e-95
CarD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 202.0
  • Bit_score: 344
  • Evalue 2.00e-92

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCTGACCCAGCGCCAGGGCTTCAAGACCAACGAGTTCGTGGTTTATCCGGCGCACGGCGTCGGCCAGATTCTGGCGATCGAGGAGCAGGAGATCGCGGGCGCCACCCTGGAACTGTTCGTGATCAATTTCATCAAGGACAAGATGACCCTGCGGGTGCCGACGGCGAAGGTCGCCAATGTCGGCATGCGCAAGCTGTCCGATCCGGCGCTGGTCAAGCGGGCGCTCGAGACGCTGAAGGGCCGTGCCCGCGTCAAGCGCACGATGTGGTCGCGCCGCGCCCAGGAATACGAAGCGAAAATCAATTCGGGCGATATCGTCGCCATCGCCGAGGTGGTGCGCGATCTGTATCGCTCCGAGTCGCAGCCCGAGCAGTCCTACAGCGAACGCCAGCTTTATGAAGCGGCGCTCGACCGGCTGTCGCGCGAAATCGCGGTGGTGCAGCACGTCACCGAGACCGAAGCGGTCAAGGAGATCGAGGCCAATCTCGCCAAGAGCCCGCGCCGCGGCGCCAAGGCGGAAGCCAGCGCCGATGCCGATGCCCCGGCGGACGACAGCGACGAGGATGGCGATGATTCCGTCGCCGAGGACGAGGCGGCCTGA
PROTEIN sequence
Length: 201
VLTQRQGFKTNEFVVYPAHGVGQILAIEEQEIAGATLELFVINFIKDKMTLRVPTAKVANVGMRKLSDPALVKRALETLKGRARVKRTMWSRRAQEYEAKINSGDIVAIAEVVRDLYRSESQPEQSYSERQLYEAALDRLSREIAVVQHVTETEAVKEIEANLAKSPRRGAKAEASADADAPADDSDEDGDDSVAEDEAA*