ggKbase home page

SCNpilot_expt_300_bf_scaffold_8805_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 898..1608

Top 3 Functional Annotations

Value Algorithm Source
rlmE; ribosomal RNA large subunit methyltransferase E (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 224.0
  • Bit_score: 398
  • Evalue 1.10e-108
Ribosomal RNA large subunit methyltransferase E {ECO:0000255|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000255|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01547}; similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 224.0
  • Bit_score: 398
  • Evalue 5.30e-108
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Oligotropha carboxidovorans RepID=RLME_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 224.0
  • Bit_score: 398
  • Evalue 3.80e-108
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCGAAAGACGACACCGGGCGGCTGCATGTCACCGTCAAGAGCGGCGGCAAGCGCAAATTGTCATCGAAGCTCTGGCTCGAGCGCCAGCTCAACGATCCCTATGTCGCGCAGGCCAAGCGCGACGGCTTCCGCTCGCGCGCGGCCTACAAGTTGCAGGAGATGGACGACAAGTTCCGTTTTCTGAAAACCGGGCAGGCGGTGGTCGATCTCGGCGCCGCGCCGGGCGGCTGGAGCCAGATCGCCGCGAAGCGCGTCGGGTCCGATCGCGGCAAGGGCAAGGTGGTGGCGATCGATCTGCTCGAGATGCCCGACATTCCGGGCGTGACCTTCGCGCAGCTCGACTTTCTCGCCGAGAACGCGCCGGAAAAATTGCGCGCCATGCTGGGTGGCGGCGCCGATGTCGTGATGTCGGACATGGCTGCGAACACCACGGGCCATCGCAAGACCGATCAGCTCCGGATCGTCGGGCTGGTCGAAAGCGCCGCGGCGTTTGCCGCCGAGGTGCTCAATCCCGGCGGCACATTCGTCGCCAAGGTGTTCCAGAGCGGCGCCGATGCCGTGCTGCTGGCGCAGCTCAAGCGCGATTTCACCACGGTGCGCCACGTCAAGCCGGCGGCCAGCCGGCAGGATTCCTCGGAACGCTATTTGCTGGCGACCGGATATCGCGGAACGCCCGCCGCCGCGCCATCCGGCGACGAGCCTAGTTGA
PROTEIN sequence
Length: 237
MAKDDTGRLHVTVKSGGKRKLSSKLWLERQLNDPYVAQAKRDGFRSRAAYKLQEMDDKFRFLKTGQAVVDLGAAPGGWSQIAAKRVGSDRGKGKVVAIDLLEMPDIPGVTFAQLDFLAENAPEKLRAMLGGGADVVMSDMAANTTGHRKTDQLRIVGLVESAAAFAAEVLNPGGTFVAKVFQSGADAVLLAQLKRDFTTVRHVKPAASRQDSSERYLLATGYRGTPAAAPSGDEPS*