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SCNpilot_expt_300_bf_scaffold_8980_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..432

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 143.0
  • Bit_score: 255
  • Evalue 4.40e-65
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 143.0
  • Bit_score: 239
  • Evalue 5.00e-61
tRNA pseudouridine synthase A n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6T1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 143.0
  • Bit_score: 255
  • Evalue 3.20e-65

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
CGGTTCTCCGCGATCCGCCGCCATTACATCTATCGCATCGTCAATCACCGCGCCAACCTCGCACTGAAAATGGGACACGCCTGGCGCGTGCCGCGGCACCTCGACGCCGAGGTGATGCATCACGCGGCGCAGGTCTTGATCGGCAAGCACGACTTCACCACCTTCCGCGACACCGAGTGTCAGGCGAAGTCGCCGGACAAGACGCTCGATGTGCTCGGCGTCACGCGTGACGGCGACAATATCGATATCACGACCTCCGCCCGCTCGTTCCTGCACAGTCAGGTACGCTCGATGGTCGGCTCGCTGGTGTGGGTCGGTTACGGCCGCTGGAGTTCGGATGATCTGCGCGCGGCGCTGGAGGCGCGTGATCGCAAGGCTTGCGGCCCCGTCGCGCCGCCGGACGGGCTCTATCTCGTGCGGGTGGATTATTGA
PROTEIN sequence
Length: 144
RFSAIRRHYIYRIVNHRANLALKMGHAWRVPRHLDAEVMHHAAQVLIGKHDFTTFRDTECQAKSPDKTLDVLGVTRDGDNIDITTSARSFLHSQVRSMVGSLVWVGYGRWSSDDLRAALEARDRKACGPVAPPDGLYLVRVDY*